The 2.0 version of rSNPBase

Variant report

Variant rs6657707
Chromosome Location chr1:63258650-63258651
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63250600-63262400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr1:63250600-63266600 Weak transcription Gastric stomach
3 chr1:63250800-63319000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:63251000-63259600 Weak transcription Stomach Mucosa stomach
5 chr1:63251000-63266600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:63251000-63269600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:63251000-63272600 Weak transcription Fetal Muscle Leg muscle
8 chr1:63251000-63274800 Weak transcription Fetal Intestine Small intestine
9 chr1:63251000-63296000 Weak transcription Fetal Thymus thymus
10 chr1:63251000-63317800 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr1:63251000-63327400 Weak transcription Fetal Stomach stomach
12 chr1:63251200-63260200 Weak transcription Primary hematopoietic stem cells blood
13 chr1:63251200-63327400 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr1:63251400-63259000 Weak transcription Primary B cells from peripheral blood blood
15 chr1:63251400-63261200 Weak transcription Primary monocytes fromperipheralblood blood
16 chr1:63251400-63264800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr1:63251400-63275600 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr1:63251800-63260800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:63251800-63273000 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr1:63252000-63266600 Weak transcription Colon Smooth Muscle Colon
21 chr1:63252000-63269600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:63252000-63284400 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr1:63252800-63259000 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr1:63252800-63272400 Weak transcription Primary T cells from cord blood blood
25 chr1:63256800-63260200 Enhancers Brain Inferior Temporal Lobe brain
26 chr1:63257400-63293400 Weak transcription Brain Anterior Caudate brain
27 chr1:63257600-63259600 Weak transcription Brain Angular Gyrus brain
28 chr1:63258000-63259400 Weak transcription Brain Substantia Nigra brain
29 chr1:63258200-63258800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr1:63258200-63259000 Weak transcription Primary B cells from cord blood blood
31 chr1:63258400-63259200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
32 chr1:63258400-63261400 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr1:63258600-63259000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:63258600-63259600 Weak transcription Brain Cingulate Gyrus brain
35 chr1:63258600-63259800 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015