The 2.0 version of rSNPBase

Variant report

Variant rs7540030
Chromosome Location chr1:63249975-63249976
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63248200-63250600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr1:63248400-63250800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr1:63248800-63250200 Active TSS Primary T cells from cord blood blood
4 chr1:63248800-63250200 Active TSS Primary T helper cells fromperipheralblood blood
5 chr1:63248800-63250200 Active TSS Liver Liver
6 chr1:63248800-63250200 Active TSS Fetal Brain Female brain
7 chr1:63248800-63250400 Active TSS Rectal Mucosa Donor 29 rectum
8 chr1:63248800-63250600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:63248800-63250600 Active TSS Fetal Intestine Large intestine
10 chr1:63248800-63250600 Active TSS Fetal Intestine Small intestine
11 chr1:63248800-63250800 Active TSS Brain Germinal Matrix brain
12 chr1:63248800-63250800 Active TSS Right Ventricle heart
13 chr1:63248800-63251000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:63248800-63251000 Active TSS Right Atrium heart
15 chr1:63248800-63251000 Active TSS A549 lung
16 chr1:63248800-63252000 Active TSS Brain Hippocampus Middle brain
17 chr1:63248800-63252200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
18 chr1:63249000-63250000 Active TSS Primary T helper memory cells from peripheral blood 2 blood
19 chr1:63249000-63250000 Active TSS Duodenum Mucosa Duodenum
20 chr1:63249000-63250200 Active TSS Primary T helper cells PMA-I stimulated --
21 chr1:63249000-63250200 Active TSS Primary T killer memory cells from peripheral blood blood
22 chr1:63249000-63250200 Active TSS Cortex derived primary cultured neurospheres brain
23 chr1:63249000-63250200 Active TSS Spleen Spleen
24 chr1:63249000-63250400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:63249000-63250400 Active TSS Adipose Nuclei Adipose
26 chr1:63249000-63250400 Active TSS Brain Angular Gyrus brain
27 chr1:63249000-63250400 Active TSS Duodenum Smooth Muscle Duodenum
28 chr1:63249000-63250400 Active TSS Placenta Placenta
29 chr1:63249000-63250400 Active TSS Fetal Thymus thymus
30 chr1:63249000-63250400 Active TSS Placenta Amnion Placenta Amnion
31 chr1:63249000-63250400 Active TSS Rectal Mucosa Donor 31 rectum
32 chr1:63249000-63250400 Active TSS Rectal Smooth Muscle rectum
33 chr1:63249000-63250400 Active TSS Sigmoid Colon Sigmoid Colon
34 chr1:63249000-63250400 Active TSS Skeletal Muscle Male skeletal muscle
35 chr1:63249000-63250400 Active TSS Skeletal Muscle Female skeletal muscle
36 chr1:63249000-63250400 Active TSS Thymus Thymus
37 chr1:63249000-63250400 Active TSS HUVEC blood vessel
38 chr1:63249000-63250400 Active TSS NHEK skin
39 chr1:63249000-63250600 Active TSS Primary T killer naive cells fromperipheralblood blood
40 chr1:63249000-63250600 Active TSS Muscle Satellite Cultured Cells --
41 chr1:63249000-63250600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:63249000-63250600 Active TSS Colon Smooth Muscle Colon
43 chr1:63249000-63250600 Active TSS Esophagus oesophagus
44 chr1:63249000-63250600 Active TSS Gastric stomach
45 chr1:63249000-63250600 Active TSS Ovary ovary
46 chr1:63249000-63250600 Active TSS Pancreas Pancrea
47 chr1:63249000-63250600 Active TSS HMEC breast
48 chr1:63249000-63250600 Active TSS NH-A brain
49 chr1:63249000-63250800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:63249000-63250800 Active TSS Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015