Variant report

Variant	rs11208021
Chromosome Location	chr1:63225534-63225535
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10749734	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10789125	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10889371	0.81[ASN][1000 genomes]
rs10889372	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10889375	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10889376	0.80[ASN][1000 genomes]
rs11208019	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11208023	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11208024	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11208025	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11208026	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11208027	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs11208032	0.81[ASN][1000 genomes]
rs11579171	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs11807368	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12129919	0.83[ASN][1000 genomes]
rs12138091	0.80[ASN][1000 genomes]
rs12567340	0.89[ASN][1000 genomes]
rs2149115	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4396149	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6656747	0.80[ASN][1000 genomes]
rs6657707	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6664372	0.81[ASN][1000 genomes]
rs6664677	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6702274	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7517722	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:63219600-63226800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr1:63221200-63226400	Weak transcription	Placenta	Placenta
3	chr1:63222600-63226600	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr1:63222600-63226800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr1:63224600-63225800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr1:63225000-63225800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr1:63225400-63225600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr1:63225400-63226800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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