Variant report

Variant rs6665543
Chromosome Location chr1:77749836-77749837
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77747000-77750400 Active TSS Brain Inferior Temporal Lobe brain
2 chr1:77747000-77750600 Active TSS Brain Substantia Nigra brain
3 chr1:77747200-77751000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
4 chr1:77747400-77750000 Active TSS Muscle Satellite Cultured Cells --
5 chr1:77747400-77750200 Active TSS Brain Hippocampus Middle brain
6 chr1:77747400-77750400 Active TSS Brain Angular Gyrus brain
7 chr1:77747400-77750600 Active TSS Brain Cingulate Gyrus brain
8 chr1:77748600-77750000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:77749000-77750000 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr1:77749000-77750800 Active TSS Brain Anterior Caudate brain
11 chr1:77749000-77779200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:77749200-77750000 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr1:77749200-77754800 Weak transcription HSMMtube muscle
14 chr1:77749200-77778400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:77749400-77750000 Enhancers H1 Cell Line embryonic stem cell
16 chr1:77749400-77750000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:77749400-77750000 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
18 chr1:77749400-77750000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
19 chr1:77749400-77750000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:77749400-77750000 Bivalent Enhancer Primary T cells from cord blood blood
21 chr1:77749400-77750200 Active TSS NHLF lung
22 chr1:77749400-77750600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:77749400-77750800 Enhancers Primary T helper cells PMA-I stimulated --
24 chr1:77749400-77751200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:77749400-77751400 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr1:77749400-77752600 Weak transcription HSMM muscle
27 chr1:77749400-77754600 Weak transcription Osteobl bone
28 chr1:77749400-77755600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:77749400-77781600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:77749600-77750000 Enhancers H9 Cell Line embryonic stem cell
31 chr1:77749600-77750200 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
32 chr1:77749600-77750200 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
33 chr1:77749600-77750200 Flanking Active TSS NHDF-Ad bronchial
34 chr1:77749600-77750400 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
35 chr1:77749800-77750000 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
36 chr1:77749800-77750000 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
37 chr1:77749800-77750000 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
38 chr1:77749800-77754000 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr1:77749800-77768800 Weak transcription Primary T helper cells fromperipheralblood blood

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