The 2.0 version of rSNPBase

Variant report

Variant rs72679542
Chromosome Location chr1:77813511-77813512
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77789000-77831200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:77795000-77836400 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr1:77801000-77825800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr1:77803400-77839200 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr1:77808800-77813600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:77809000-77819200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:77809200-77814400 Weak transcription Brain Hippocampus Middle brain
8 chr1:77811600-77814800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:77811600-77815000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:77812400-77813600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
11 chr1:77812400-77813600 Enhancers Primary T helper cells PMA-I stimulated --
12 chr1:77812400-77815600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:77812600-77813800 Enhancers Primary T regulatory cells fromperipheralblood blood
14 chr1:77812800-77813600 Enhancers Primary T helper naive cells fromperipheralblood blood
15 chr1:77812800-77813600 Enhancers HSMM muscle
16 chr1:77812800-77813800 Enhancers Primary T helper cells fromperipheralblood blood
17 chr1:77812800-77813800 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr1:77812800-77814400 Enhancers Primary T cells from cord blood blood
19 chr1:77812800-77814600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
20 chr1:77813000-77813600 Enhancers H9 Cell Line embryonic stem cell
21 chr1:77813000-77813800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr1:77813000-77813800 Flanking Active TSS A549 lung
23 chr1:77813000-77813800 Enhancers NHLF lung
24 chr1:77813000-77814000 Enhancers HSMMtube muscle
25 chr1:77813000-77814400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:77813000-77814800 Enhancers Brain Substantia Nigra brain
27 chr1:77813000-77815000 Enhancers Muscle Satellite Cultured Cells --
28 chr1:77813000-77816600 Enhancers NHDF-Ad bronchial
29 chr1:77813200-77813800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:77813200-77813800 Flanking Active TSS Osteobl bone
31 chr1:77813400-77813600 Enhancers Primary Natural Killer cells fromperipheralblood blood
32 chr1:77813400-77813600 Enhancers Brain Angular Gyrus brain
33 chr1:77813400-77813600 Flanking Active TSS K562 blood
34 chr1:77813400-77813800 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:77813400-77813800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:77813400-77813800 Enhancers Primary hematopoietic stem cells blood
37 chr1:77813400-77813800 Enhancers Primary T helper 17 cells PMA-I stimulated --
38 chr1:77813400-77813800 Enhancers Primary T killer memory cells from peripheral blood blood
39 chr1:77813400-77813800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:77813400-77813800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:77813400-77813800 Enhancers HUVEC blood vessel
42 chr1:77813400-77813800 Enhancers Monocytes-CD14+_RO01746 blood
43 chr1:77813400-77814000 Enhancers NH-A brain
44 chr1:77813400-77814600 Enhancers Brain Cingulate Gyrus brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015