The 2.0 version of rSNPBase

Variant report

Variant rs6671019
Chromosome Location chr1:213291523-213291524
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213244200-213296200 Weak transcription NHDF-Ad bronchial
2 chr1:213251200-213293000 Weak transcription NH-A brain
3 chr1:213252600-213297200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:213254800-213297400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:213261600-213293000 Weak transcription NHLF lung
6 chr1:213261600-213296000 Weak transcription Lung lung
7 chr1:213261600-213309200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:213261600-213327400 Weak transcription Aorta Aorta
9 chr1:213269200-213293000 Weak transcription Muscle Satellite Cultured Cells --
10 chr1:213269200-213296200 Weak transcription Brain Hippocampus Middle brain
11 chr1:213269400-213308400 Weak transcription Ovary ovary
12 chr1:213269600-213311800 Weak transcription Primary B cells from cord blood blood
13 chr1:213270000-213296000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:213271000-213297000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:213271200-213296200 Weak transcription Fetal Intestine Small intestine
16 chr1:213271200-213309200 Weak transcription Adipose Nuclei Adipose
17 chr1:213271400-213296400 Weak transcription Fetal Intestine Large intestine
18 chr1:213271600-213310200 Weak transcription Fetal Muscle Trunk muscle
19 chr1:213280800-213297400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr1:213281000-213293000 Weak transcription HSMM muscle
21 chr1:213281200-213296000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:213281200-213301000 Weak transcription Fetal Lung lung
23 chr1:213281200-213309000 Weak transcription Primary monocytes fromperipheralblood blood
24 chr1:213281200-213309400 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:213281200-213320400 Weak transcription Primary T cells from cord blood blood
26 chr1:213281400-213291600 Weak transcription K562 blood
27 chr1:213281400-213293000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:213281400-213293000 Weak transcription Liver Liver
29 chr1:213281400-213303400 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr1:213281400-213311000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:213281600-213293000 Weak transcription Osteobl bone
32 chr1:213283800-213293400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:213284200-213292200 Weak transcription Psoas Muscle Psoas
34 chr1:213284200-213293800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:213284200-213296200 Weak transcription Pancreas Pancrea
36 chr1:213284200-213317200 Weak transcription Left Ventricle heart
37 chr1:213284600-213293200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:213284600-213293400 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr1:213284600-213309400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr1:213284600-213349800 Weak transcription Primary T cells fromperipheralblood blood
41 chr1:213285400-213317200 Weak transcription Fetal Kidney kidney
42 chr1:213285600-213293000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr1:213285600-213303000 Weak transcription GM12878-XiMat blood
44 chr1:213290800-213292400 Strong transcription Primary hematopoietic stem cells blood
45 chr1:213291000-213292000 Enhancers Brain Inferior Temporal Lobe brain
46 chr1:213291000-213293400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:213291200-213293000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr1:213291200-213294800 Weak transcription Fetal Brain Female brain
49 chr1:213291400-213293800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015