Variant report

Variant	rs667890
Chromosome Location	chr6:133816188-133816189
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs212765	0.86[EUR][1000 genomes]
rs212771	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs212773	0.86[EUR][1000 genomes]
rs212774	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs212775	0.84[EUR][1000 genomes]
rs212776	0.83[EUR][1000 genomes]
rs212777	0.81[EUR][1000 genomes]
rs2277083	0.84[EUR][1000 genomes]
rs561826	0.83[EUR][1000 genomes]
rs568911	0.95[ASN][1000 genomes]
rs598286	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs598699	0.84[EUR][1000 genomes]
rs667955	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6913726	0.84[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133765800-133822000	Weak transcription	Psoas Muscle	Psoas
2	chr6:133787400-133822800	Weak transcription	Fetal Lung	lung
3	chr6:133790800-133821600	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr6:133808600-133822000	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr6:133809600-133816800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr6:133810200-133820800	Weak transcription	Fetal Muscle Leg	muscle
7	chr6:133810200-133821400	Weak transcription	Hela-S3	cervix
8	chr6:133812200-133820400	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr6:133815800-133817600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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