Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10158515	1.00[EUR][1000 genomes]
rs10495020	1.00[EUR][1000 genomes]
rs11120749	0.83[YRI][hapmap]
rs11120760	0.92[YRI][hapmap]
rs11120761	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12067103	1.00[EUR][1000 genomes]
rs12073672	1.00[EUR][1000 genomes]
rs12078537	0.83[YRI][hapmap]
rs12085974	1.00[EUR][1000 genomes]
rs12086210	0.92[YRI][hapmap]
rs12091266	1.00[EUR][1000 genomes]
rs12091601	1.00[EUR][1000 genomes]
rs58809093	1.00[EUR][1000 genomes]
rs59175279	1.00[EUR][1000 genomes]
rs61209724	1.00[EUR][1000 genomes]
rs6668781	1.00[EUR][1000 genomes]
rs73096657	1.00[EUR][1000 genomes]
rs73098604	1.00[EUR][1000 genomes]
rs74141506	1.00[EUR][1000 genomes]
rs74141508	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1006504	chr1:215890460-216642124	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv535288	chr1:215890460-216642124	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv549199	chr1:216384908-216814702	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216498600-216500000	Enhancers	NHEK	skin
2	chr1:216498800-216499400	Enhancers	Muscle Satellite Cultured Cells	--
3	chr1:216498800-216500000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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