The 2.0 version of rSNPBase

Variant report

Variant rs66804824
Chromosome Location chr1:93839867-93839868
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93813400-93840000 Weak transcription H9 Cell Line embryonic stem cell
2 chr1:93813400-93840400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:93816600-93841800 Weak transcription Brain Cingulate Gyrus brain
4 chr1:93816800-93841200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:93822200-93840200 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:93824200-93840000 Weak transcription Right Ventricle heart
7 chr1:93824200-93841000 Weak transcription Brain Germinal Matrix brain
8 chr1:93824200-93841000 Weak transcription Spleen Spleen
9 chr1:93824400-93842000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:93824600-93840000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:93825200-93840800 Weak transcription Brain Inferior Temporal Lobe brain
12 chr1:93825400-93840600 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr1:93826200-93841400 Weak transcription Brain Hippocampus Middle brain
14 chr1:93828200-93842400 Weak transcription Primary hematopoietic stem cells blood
15 chr1:93829200-93843600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:93831600-93841000 Weak transcription NHEK skin
17 chr1:93831800-93840600 Weak transcription A549 lung
18 chr1:93832400-93840000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:93833200-93841200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr1:93833200-93841200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:93833200-93841400 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr1:93833400-93840000 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr1:93833400-93840000 Weak transcription Fetal Muscle Leg muscle
24 chr1:93833400-93841000 Weak transcription Primary T cells fromperipheralblood blood
25 chr1:93833400-93841200 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:93833400-93841200 Weak transcription Fetal Intestine Large intestine
27 chr1:93833600-93840000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr1:93833600-93840800 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr1:93833800-93841400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:93834200-93840000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:93834200-93841200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:93834200-93841400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:93834200-93841400 Weak transcription Muscle Satellite Cultured Cells --
34 chr1:93834200-93848200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:93834400-93840400 Weak transcription Duodenum Mucosa Duodenum
36 chr1:93834400-93841400 Weak transcription Fetal Lung lung
37 chr1:93834400-93842400 Weak transcription Primary B cells from cord blood blood
38 chr1:93834600-93840000 Weak transcription NHDF-Ad bronchial
39 chr1:93834600-93840400 Weak transcription Primary B cells from peripheral blood blood
40 chr1:93835800-93850400 Weak transcription Dnd41 blood
41 chr1:93836000-93841000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:93836000-93843400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:93836000-93848000 Weak transcription HSMM muscle
44 chr1:93836600-93840600 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr1:93836800-93840800 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr1:93837800-93841000 Strong transcription Cortex derived primary cultured neurospheres brain
47 chr1:93838800-93840800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr1:93839200-93840200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:93839200-93840200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:93839200-93840400 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015