The 2.0 version of rSNPBase

Variant report

Variant rs668154
Chromosome Location chr1:176131254-176131255
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:176054400-176131600 Weak transcription NH-A brain
2 chr1:176055000-176141600 Weak transcription Hela-S3 cervix
3 chr1:176065600-176154800 Weak transcription Aorta Aorta
4 chr1:176069000-176139200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:176069200-176138800 Weak transcription HUVEC blood vessel
6 chr1:176070400-176151400 Weak transcription Pancreas Pancrea
7 chr1:176072000-176140600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:176085400-176142400 Weak transcription Lung lung
9 chr1:176096000-176138800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr1:176100800-176153200 Weak transcription Colonic Mucosa Colon
11 chr1:176110600-176164000 Weak transcription NHLF lung
12 chr1:176111800-176139400 Weak transcription Muscle Satellite Cultured Cells --
13 chr1:176116000-176146200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:176122000-176139800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:176123800-176139800 Weak transcription Fetal Kidney kidney
16 chr1:176123800-176144200 Weak transcription Left Ventricle heart
17 chr1:176123800-176150000 Weak transcription Osteobl bone
18 chr1:176126000-176132000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:176126400-176168800 Weak transcription Small Intestine intestine
20 chr1:176126800-176139800 Weak transcription HSMMtube muscle
21 chr1:176127000-176147000 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:176127000-176174000 Weak transcription Colon Smooth Muscle Colon
23 chr1:176127200-176137800 Weak transcription HSMM muscle
24 chr1:176127200-176153400 Weak transcription Brain Inferior Temporal Lobe brain
25 chr1:176127400-176139200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:176127400-176139600 Weak transcription Brain Anterior Caudate brain
27 chr1:176127400-176140200 Weak transcription Brain Hippocampus Middle brain
28 chr1:176127400-176141200 Weak transcription HMEC breast
29 chr1:176127400-176143200 Weak transcription Brain Substantia Nigra brain
30 chr1:176127400-176144200 Weak transcription A549 lung
31 chr1:176127400-176153400 Weak transcription Stomach Smooth Muscle stomach
32 chr1:176127400-176155400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr1:176127600-176132800 Strong transcription Primary T helper naive cells fromperipheralblood blood
34 chr1:176127600-176138200 Weak transcription Fetal Brain Male brain
35 chr1:176127600-176138800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:176127600-176139200 Weak transcription Fetal Brain Female brain
37 chr1:176128000-176139600 Weak transcription Psoas Muscle Psoas
38 chr1:176128000-176144200 Weak transcription Gastric stomach
39 chr1:176128000-176147000 Weak transcription Stomach Mucosa stomach
40 chr1:176128000-176157800 Weak transcription Spleen Spleen
41 chr1:176128000-176175200 Weak transcription Esophagus oesophagus
42 chr1:176128200-176131400 Strong transcription Duodenum Mucosa Duodenum
43 chr1:176128200-176135800 Strong transcription Primary B cells from peripheral blood blood
44 chr1:176128200-176136000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr1:176128200-176136200 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr1:176128200-176138800 Weak transcription Fetal Muscle Leg muscle
47 chr1:176128200-176139600 Weak transcription Fetal Intestine Small intestine
48 chr1:176128400-176133800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr1:176128400-176134400 Strong transcription Primary monocytes fromperipheralblood blood
50 chr1:176128400-176154600 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015