Variant report

Variant	rs6682411
Chromosome Location	chr1:153747616-153747617
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:126)
CpG islands
(count:122)
Chromatin interactive
region (count:23)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:126 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TCF12	chr1:153747452-153748803	ECC-1	luminal epithelium:	n/a	n/a
2	STAT3	chr1:153747350-153747688	MCF10A-Er-Src	breast:	n/a	n/a
3	EP300	chr1:153747375-153748880	ECC-1	luminal epithelium:	n/a	n/a
4	RFX5	chr1:153747563-153748816	Hela-S3	cervix:	n/a	n/a
5	CTCF	chr1:153747500-153747650	AG04449	skin:	n/a	n/a
6	YY1	chr1:153747404-153747962	H1-hESC	embryonic stem cell:	n/a	n/a
7	POLR2A	chr1:153747472-153748784	ECC-1	luminal epithelium:	n/a	n/a
8	SIN3AK20	chr1:153747275-153749083	MCF-7	breast:	n/a	n/a
9	CTCF	chr1:153747560-153747710	AG09319	gingival:	n/a	n/a
10	POLR2A	chr1:153747268-153748826	HL-60	blood:	n/a	n/a
11	NRF1	chr1:153747414-153748854	SK-N-SH	brain:	n/a	n/a
12	POLR2A	chr1:153747496-153748695	GM12878	blood:	n/a	n/a
13	POLR2A	chr1:153747414-153748792	Hela-S3	cervix:	n/a	n/a
14	SIN3A	chr1:153747457-153748845	H1-hESC	embryonic stem cell:	n/a	n/a
15	STAT3	chr1:153747388-153747688	MCF10A-Er-Src	breast:	n/a	n/a
16	POLR2A	chr1:153747511-153748020	HepG2	liver:	n/a	n/a
17	MAX	chr1:153747599-153748714	NB4	blood:	n/a	n/a
18	ELF1	chr1:153747519-153748832	GM12878	blood:	n/a	n/a
19	HA-E2F1	chr1:153747350-153748992	MCF-7	breast:	n/a	n/a
20	MAX	chr1:153747441-153748866	ECC-1	luminal epithelium:	n/a	n/a
21	STAT3	chr1:153747316-153747658	MCF10A-Er-Src	breast:	n/a	n/a
22	NR2F2	chr1:153747396-153748687	MCF-7	breast:	n/a	n/a
23	POLR2A	chr1:153747594-153748242	HepG2	liver:	n/a	n/a
24	POLR2A	chr1:153747422-153748842	HCT-116	colon:	n/a	n/a
25	POLR2A	chr1:153747387-153748483	GM12892	blood:	n/a	n/a
26	POLR2A	chr1:153747476-153748758	GM12878	blood:	n/a	n/a
27	POLR2A	chr1:153747584-153748172	ECC-1	luminal epithelium:	n/a	n/a
28	POLR2A	chr1:153745735-153749410	H1-hESC	embryonic stem cell:	n/a	n/a
29	SIN3AK20	chr1:153747436-153748652	PANC-1	pancreas:	n/a	n/a
30	POLR2A	chr1:153747538-153748772	HUVEC	blood vessel:	n/a	n/a
31	HA-E2F1	chr1:153747518-153748830	Hela-S3	cervix:	n/a	n/a
32	NFIC	chr1:153747170-153748077	ECC-1	luminal epithelium:	n/a	n/a
33	POLR2A	chr1:153746698-153748795	Hela-S3	cervix:	n/a	n/a
34	POLR2A	chr1:153747363-153748800	HUVEC	blood vessel:	n/a	n/a
35	YY1	chr1:153747528-153748450	ECC-1	luminal epithelium:	n/a	n/a
36	POLR2A	chr1:153747461-153748941	Hela-S3	cervix:	n/a	n/a
37	POLR2A	chr1:153747523-153748792	GM19099	blood:	n/a	n/a
38	PML	chr1:153747482-153748365	MCF-7	breast:	n/a	n/a
39	POLR2A	chr1:153747561-153748315	HUVEC	blood vessel:	n/a	n/a
40	TCF12	chr1:153747391-153748724	ECC-1	luminal epithelium:	n/a	n/a
41	TAF1	chr1:153747526-153748860	ECC-1	luminal epithelium:	n/a	n/a
42	ELF1	chr1:153747564-153748675	MCF-7	breast:	n/a	n/a
43	POLR2A	chr1:153747458-153748794	GM18505	blood:	n/a	n/a
44	SIN3AK20	chr1:153747566-153747950	SK-N-SH	brain:	n/a	n/a
45	MAX	chr1:153747441-153748856	HepG2	liver:	n/a	n/a
46	STAT5A	chr1:153747367-153747692	GM12878	blood:	n/a	n/a
47	POLR2A	chr1:153747377-153748931	HCT-116	colon:	n/a	n/a
48	YY1	chr1:153747552-153748288	ECC-1	luminal epithelium:	n/a	n/a
49	MYC	chr1:153747570-153748538	NB4	blood:	n/a	n/a
50	ELF1	chr1:153747433-153748884	MCF-7	breast:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:153747609-153747659	MCF-7	breast:	n/a
2	chr1:153747609-153747659	HEK293	kidney:	embryo
3	chr1:153747600-153747650	HMEC	breast:	n/a
4	chr1:153747609-153747659	Hela-S3	cervix:	n/a
5	chr1:153747609-153747659	HAEpiC	amniotic membrane:	n/a
6	chr1:153747600-153747650	SK-N-SH	brain:	n/a
7	chr1:153747609-153747659	NHDF-neo	bronchial:	n/a
8	chr1:153747609-153747659	PFSK-1	brain:	n/a
9	chr1:153747600-153747650	AG04450	lung:	fetal
10	chr1:153747609-153747659	BE2_C	brain:	n/a
11	chr1:153747600-153747650	HPAEpiC	pulmonary alveolar:	n/a
12	chr1:153747609-153747659	ProgFib	skin:	n/a
13	chr1:153747600-153747650	AoSMC	blood vessel:	n/a
14	chr1:153747600-153747650	HEEpiC	esophagus:	n/a
15	chr1:153747609-153747659	T-47D	breast:	n/a
16	chr1:153747609-153747659	HCF	heart:	n/a
17	chr1:153747600-153747650	Caco-2	colon:	n/a
18	chr1:153747600-153747650	HNPCEpiC	eye:	n/a
19	chr1:153747600-153747650	GM12892	blood:	n/a
20	chr1:153747609-153747659	HPAEpiC	pulmonary alveolar:	n/a
21	chr1:153747609-153747659	SK-N-MC	brain:	n/a
22	chr1:153747600-153747650	CMK	blood:	n/a
23	chr1:153747600-153747650	HCPEpiC	choroid plexus:	n/a
24	chr1:153747600-153747650	HCF	heart:	n/a
25	chr1:153747609-153747659	SAEC	small airway:	n/a
26	chr1:153747609-153747659	HepG2	liver:	n/a
27	chr1:153747609-153747659	MCF10A-Er-Src	breast:	n/a
28	chr1:153747609-153747659	SK-N-SH_RA	brain:	n/a
29	chr1:153747609-153747659	BJ	skin:	n/a
30	chr1:153747609-153747659	HRCEpiC	kidney:	n/a
31	chr1:153747609-153747659	LNCaP	prostate:	n/a
32	chr1:153747609-153747659	CMK	blood:	n/a
33	chr1:153747600-153747650	PrEC	prostate:	n/a
34	chr1:153747600-153747650	Hela-S3	cervix:	n/a
35	chr1:153747609-153747659	GM06990	blood:	n/a
36	chr1:153747609-153747659	HRE	kidney:	n/a
37	chr1:153747609-153747659	PrEC	prostate:	n/a
38	chr1:153747600-153747650	HIPEpiC	eye:	n/a
39	chr1:153747609-153747659	H1-hESC	embryonic stem cell:	embryo
40	chr1:153747609-153747659	AG09309	skin:	n/a
41	chr1:153747600-153747650	AG10803	skin:	n/a
42	chr1:153747609-153747659	HUVEC	blood vessel:	n/a
43	chr1:153747600-153747650	AG09309	skin:	n/a
44	chr1:153747600-153747650	A549	lung:	n/a
45	chr1:153747600-153747650	HCM	heart:	n/a
46	chr1:153747600-153747650	Hepatocyte	liver:	n/a
47	chr1:153747600-153747650	IMR90	lung:	fetal
48	chr1:153747600-153747650	NHBE	bronchial:	n/a
49	chr1:153747600-153747650	GM12891	blood:	n/a
50	chr1:153747609-153747659	HRPEpiC	eye:	n/a

(count:23 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:153747034..153749819-chr1:153917632..153921416,5	MCF-7	breast:
2	chr1:153721868..153723667-chr1:153746625..153749637,3	MCF-7	breast:
3	chr1:153745383..153747706-chr1:153962241..153964631,3	K562	blood:
4	chr1:153746879..153748867-chr1:153894033..153896594,2	K562	blood:
5	chr1:153537152..153539160-chr1:153746062..153748854,2	MCF-7	breast:
6	chr1:153604928..153608647-chr1:153747112..153750594,4	MCF-7	breast:
7	chr1:153648500..153651688-chr1:153746725..153749419,3	MCF-7	breast:
8	chr1:153747107..153752136-chr1:153929206..153936862,9	MCF-7	breast:
9	chr1:153729430..153731095-chr1:153746987..153749795,2	MCF-7	breast:
10	chr1:153642143..153644918-chr1:153747497..153749679,4	MCF-7	breast:
11	chr1:153747289..153750894-chr1:153961895..153964874,3	MCF-7	breast:
12	chr1:153746887..153748770-chr1:153957005..153959457,3	MCF-7	breast:
13	chr1:153745179..153749280-chr1:153961747..153968478,7	MCF-7	breast:
14	chr1:153742918..153749628-chr1:153933334..153942122,16	MCF-7	breast:
15	chr1:153641872..153644049-chr1:153747164..153750461,3	MCF-7	breast:
16	chr1:153747310..153750060-chr1:153937716..153939765,3	MCF-7	breast:
17	chr1:153652004..153654217-chr1:153745758..153747753,2	K562	blood:
18	chr1:153605481..153608017-chr1:153747130..153748871,2	MCF-7	breast:
19	chr1:153599154..153601344-chr1:153747056..153749212,2	MCF-7	breast:
20	chr1:153747328..153749259-chr1:153765897..153767702,2	MCF-7	breast:
21	chr1:153732136..153734221-chr1:153747059..153748574,2	MCF-7	breast:
22	chr1:153720924..153726415-chr1:153745287..153750957,9	MCF-7	breast:
23	chr1:153747168..153749563-chr1:153948647..153951323,3	MCF-7	breast:

No data

Variant related genes	Relation type
SLC27A3	TF binding region
SLC27A3	CpG island
ENSG00000143545	Chromatin interaction
ENSG00000143621	Chromatin interaction
ENSG00000160741	Chromatin interaction
ENSG00000143614	Chromatin interaction
ENSG00000177954	Chromatin interaction
ENSG00000233222	Chromatin interaction
ENSG00000198837	Chromatin interaction
ENSG00000160679	Chromatin interaction
ENSG00000231416	Chromatin interaction
ENSG00000143578	Chromatin interaction
ENSG00000189171	Chromatin interaction
ENSG00000231827	Chromatin interaction
ENSG00000143624	Chromatin interaction
ENSG00000271853	Chromatin interaction
ENSG00000273026	Chromatin interaction
ENSG00000169418	Chromatin interaction
ENSG00000272030	Chromatin interaction
ENSG00000143570	Chromatin interaction
ENSG00000196754	Chromatin interaction
ENSG00000143543	Chromatin interaction
ENSG00000160678	Chromatin interaction
ENSG00000272654	Chromatin interaction
ENSG00000243613	Chromatin interaction

Extended variants
information (count: 55 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10082235	1.00[CHB][hapmap]
rs11264299	0.90[EUR][1000 genomes]
rs11264336	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1132619	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12062022	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12068901	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12070179	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12070559	0.98[EUR][1000 genomes]
rs12071801	0.98[EUR][1000 genomes]
rs12076697	0.90[EUR][1000 genomes]
rs12097043	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[GIH][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12097583	0.96[EUR][1000 genomes]
rs36064263	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3891075	1.00[CHB][hapmap]
rs4073768	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[GIH][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs41265191	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs55658698	0.90[EUR][1000 genomes]
rs55778008	0.90[EUR][1000 genomes]
rs56167936	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56910871	0.90[EUR][1000 genomes]
rs60100741	0.81[EUR][1000 genomes]
rs60316596	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs60827720	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61803563	0.90[EUR][1000 genomes]
rs61803565	0.90[EUR][1000 genomes]
rs61803566	0.85[EUR][1000 genomes]
rs61803567	0.94[EUR][1000 genomes]
rs61803571	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs61803573	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6427085	0.87[EUR][1000 genomes]
rs6660232	0.81[EUR][1000 genomes]
rs6663011	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6663988	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[GIH][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.94[TSI][hapmap];0.84[YRI][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6672371	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[GIH][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.94[TSI][hapmap];0.84[YRI][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6687602	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6689176	0.90[EUR][1000 genomes]
rs6692298	1.00[CHB][hapmap]
rs74115713	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7512561	0.81[EUR][1000 genomes]
rs7515716	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7520045	0.81[EUR][1000 genomes]
rs7533987	1.00[CHB][hapmap]
rs7536700	1.00[CHB][hapmap]
rs7543790	1.00[CHB][hapmap]
rs7556155	0.89[EUR][1000 genomes]
rs7556379	0.81[EUR][1000 genomes]
rs7556575	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1011897	chr1:153613597-153836703	Active TSS Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
2	nsv999364	chr1:153622634-154419436	Strong transcription Genic enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	286 gene(s)	inside rSNPs	diseases
3	nsv535175	chr1:153622634-154419436	Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	286 gene(s)	inside rSNPs	diseases
4	nsv531892	chr1:153671910-153954090	Flanking Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	136 gene(s)	inside rSNPs	diseases
5	nsv464039	chr1:153708906-153801098	Genic enhancers Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
6	nsv547941	chr1:153708906-153801098	Genic enhancers Flanking Active TSS Strong transcription Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
7	nsv817392	chr1:153724807-153870005	Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
8	nsv532551	chr1:153732039-154192279	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	233 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs6682411	SLC27A3	cis	lymphoblastoid	seeQTL
rs6682411	ENSG00000143554	cis	multi-tissue	Pritchard
rs6682411	S100A13	cis	lymphoblastoid	seeQTL

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:153712800-153751800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr1:153730800-153752600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr1:153740800-153747800	Weak transcription	Small Intestine	intestine
4	chr1:153743200-153747800	Weak transcription	HSMM	muscle
5	chr1:153744600-153747800	Weak transcription	HSMMtube	muscle
6	chr1:153745000-153747800	Weak transcription	A549	lung
7	chr1:153745200-153748000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
8	chr1:153746000-153748000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr1:153746200-153747800	Enhancers	Spleen	Spleen
10	chr1:153746400-153747800	Enhancers	Fetal Heart	heart
11	chr1:153746600-153748000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr1:153746800-153747800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr1:153747000-153748000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
14	chr1:153747000-153749200	Active TSS	HUES64 Cell Line	embryonic stem cell
15	chr1:153747000-153750400	Flanking Active TSS	Stomach Smooth Muscle	stomach
16	chr1:153747000-153755400	Weak transcription	Dnd41	blood
17	chr1:153747200-153747800	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
18	chr1:153747200-153747800	Flanking Active TSS	Fetal Stomach	stomach
19	chr1:153747200-153748000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
20	chr1:153747200-153748000	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
21	chr1:153747200-153748200	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr1:153747200-153748200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr1:153747200-153748600	Active TSS	Brain Anterior Caudate	brain
24	chr1:153747200-153748800	Active TSS	Rectal Smooth Muscle	rectum
25	chr1:153747200-153749000	Active TSS	ES-I3 Cell Line	embryonic stem cell
26	chr1:153747200-153749200	Active TSS	H9 Cell Line	embryonic stem cell
27	chr1:153747200-153749200	Flanking Active TSS	Liver	Liver
28	chr1:153747200-153750600	Flanking Active TSS	Adipose Nuclei	Adipose
29	chr1:153747400-153747800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr1:153747400-153747800	Flanking Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
31	chr1:153747400-153747800	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
32	chr1:153747400-153747800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
33	chr1:153747400-153747800	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
34	chr1:153747400-153747800	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr1:153747400-153747800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
36	chr1:153747400-153747800	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
37	chr1:153747400-153747800	Flanking Active TSS	Duodenum Mucosa	Duodenum
38	chr1:153747400-153747800	Flanking Active TSS	NHEK	skin
39	chr1:153747400-153748000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
40	chr1:153747400-153748000	Flanking Active TSS	Primary hematopoietic stem cells	blood
41	chr1:153747400-153748000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
42	chr1:153747400-153748000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
43	chr1:153747400-153748000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
44	chr1:153747400-153748000	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
45	chr1:153747400-153748000	Flanking Active TSS	Fetal Muscle Trunk	muscle
46	chr1:153747400-153748000	Flanking Active TSS	Fetal Muscle Leg	muscle
47	chr1:153747400-153748000	Flanking Active TSS	Placenta	Placenta
48	chr1:153747400-153748000	Flanking Active TSS	Right Ventricle	heart
49	chr1:153747400-153748000	Flanking Active TSS	GM12878-XiMat	blood
50	chr1:153747400-153748000	Flanking Active TSS	HepG2	liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links