The 2.0 version of rSNPBase

Variant report

Variant rs6684874
Chromosome Location chr1:211532060-211532061
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211509800-211544200 Weak transcription HUVEC blood vessel
2 chr1:211510600-211555400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr1:211511600-211533000 Weak transcription Left Ventricle heart
4 chr1:211514800-211552200 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr1:211515000-211555000 Weak transcription Hela-S3 cervix
6 chr1:211515000-211555800 Weak transcription Esophagus oesophagus
7 chr1:211515200-211543200 Weak transcription Colonic Mucosa Colon
8 chr1:211515400-211548400 Weak transcription Stomach Mucosa stomach
9 chr1:211519400-211549000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:211519800-211532400 Weak transcription H1 Cell Line embryonic stem cell
11 chr1:211519800-211532400 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr1:211519800-211544800 Weak transcription Fetal Kidney kidney
13 chr1:211519800-211547400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr1:211519800-211548600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:211520800-211533800 Weak transcription Colon Smooth Muscle Colon
16 chr1:211521200-211550200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:211521600-211555200 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr1:211523600-211542800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:211525000-211555600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr1:211525400-211532400 Weak transcription A549 lung
21 chr1:211525400-211550200 Weak transcription NHDF-Ad bronchial
22 chr1:211525400-211555000 Weak transcription Fetal Lung lung
23 chr1:211525600-211548200 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr1:211525600-211550200 Weak transcription H9 Cell Line embryonic stem cell
25 chr1:211526400-211542200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr1:211526400-211546400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:211526600-211534800 Strong transcription Fetal Muscle Trunk muscle
28 chr1:211526600-211555400 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr1:211526800-211550800 Weak transcription Small Intestine intestine
30 chr1:211527400-211535400 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr1:211527400-211550400 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr1:211527600-211532800 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr1:211527800-211532400 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr1:211527800-211535000 Strong transcription Primary B cells from cord blood blood
35 chr1:211528000-211535400 Weak transcription Brain Inferior Temporal Lobe brain
36 chr1:211528000-211551400 Strong transcription Primary B cells from peripheral blood blood
37 chr1:211528200-211550600 Strong transcription Primary T regulatory cells fromperipheralblood blood
38 chr1:211528400-211547600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:211528600-211533000 Strong transcription Primary T cells fromperipheralblood blood
40 chr1:211528600-211535200 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr1:211528800-211554600 Weak transcription Psoas Muscle Psoas
42 chr1:211529000-211532800 Strong transcription Primary T helper cells fromperipheralblood blood
43 chr1:211529000-211535000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:211529000-211535400 Strong transcription Primary T cells from cord blood blood
45 chr1:211529000-211539000 Strong transcription Fetal Stomach stomach
46 chr1:211529200-211538800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
47 chr1:211529400-211534200 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr1:211529400-211534600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:211529400-211550400 Strong transcription Fetal Thymus thymus
50 chr1:211529600-211535400 Strong transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015