Variant report

No.	Distal block	Cell Line	Cell type
1	chr1:57356186..57359118-chr1:57361221..57364582,4	K562	blood:
2	chr1:57343866..57346444-chr1:57354291..57357261,2	K562	blood:
3	chr1:57335538..57338188-chr1:57354917..57357199,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1342440	1.00[CEU][hapmap]
rs1360150	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1612309	1.00[CEU][hapmap]
rs1616673	1.00[CEU][hapmap]
rs1620075	1.00[CEU][hapmap]
rs17114516	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[ASN][1000 genomes]
rs17114531	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17114533	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17114548	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17114550	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17114585	1.00[CEU][hapmap]
rs17114605	1.00[CEU][hapmap]
rs1741986	1.00[CEU][hapmap]
rs1741988	1.00[CEU][hapmap]
rs1754538	1.00[CEU][hapmap]
rs1774889	1.00[CEU][hapmap]
rs1774895	1.00[CEU][hapmap]
rs1774896	1.00[CEU][hapmap]
rs1774897	1.00[CEU][hapmap]
rs59755908	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7417478	1.00[ASN][1000 genomes]
rs7547015	1.00[ASN][1000 genomes]
rs9437011	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869295	chr1:56894955-57656562	Weak transcription Strong transcription Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:57355400-57356800	Enhancers	HepG2	liver
2	chr1:57356200-57359200	Strong transcription	Liver	Liver

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