The 2.0 version of rSNPBase

Variant report

Variant rs6687910
Chromosome Location chr1:149929244-149929245
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149909400-149947000 Weak transcription Fetal Brain Male brain
2 chr1:149910000-149934200 Weak transcription Primary T cells from cord blood blood
3 chr1:149910200-149929800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:149911400-149933800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:149912600-149941600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:149912800-149933800 Weak transcription Stomach Mucosa stomach
7 chr1:149914400-149937400 Weak transcription Fetal Heart heart
8 chr1:149915000-149937600 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr1:149917000-149929400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:149917200-149931400 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr1:149917400-149929600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:149917600-149929400 Weak transcription Brain Germinal Matrix brain
13 chr1:149917600-149929600 Weak transcription Fetal Kidney kidney
14 chr1:149919800-149930000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:149919800-149930000 Weak transcription Hela-S3 cervix
16 chr1:149920200-149929400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr1:149921000-149929800 Weak transcription Muscle Satellite Cultured Cells --
18 chr1:149921200-149942600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr1:149921800-149929600 Weak transcription Brain Angular Gyrus brain
20 chr1:149921800-149929600 Weak transcription Esophagus oesophagus
21 chr1:149922000-149929400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:149922000-149929600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr1:149922200-149929400 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr1:149922200-149929400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:149922200-149929400 Weak transcription Gastric stomach
26 chr1:149922200-149929400 Weak transcription Lung lung
27 chr1:149922200-149929400 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr1:149922200-149929400 Weak transcription Spleen Spleen
29 chr1:149922200-149929600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:149922200-149929600 Weak transcription H9 Cell Line embryonic stem cell
31 chr1:149922200-149929600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr1:149922200-149929600 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:149922200-149929600 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr1:149922200-149929600 Weak transcription Rectal Smooth Muscle rectum
35 chr1:149922200-149929600 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr1:149922200-149929600 Weak transcription HUVEC blood vessel
37 chr1:149922200-149929800 Weak transcription Aorta Aorta
38 chr1:149922200-149930200 Weak transcription HepG2 liver
39 chr1:149922200-149930600 Weak transcription NHEK skin
40 chr1:149922200-149935800 Weak transcription Pancreas Pancrea
41 chr1:149922200-149936000 Weak transcription Thymus Thymus
42 chr1:149922200-149937400 Weak transcription Colonic Mucosa Colon
43 chr1:149922200-149937600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr1:149922400-149929400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:149922400-149929400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr1:149922400-149929400 Weak transcription Colon Smooth Muscle Colon
47 chr1:149922400-149929400 Weak transcription Fetal Intestine Large intestine
48 chr1:149922400-149929400 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr1:149922400-149929600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr1:149922400-149929600 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015