The 2.0 version of rSNPBase

Variant report

Variant rs35230744
Chromosome Location chr1:149932039-149932040
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149909400-149947000 Weak transcription Fetal Brain Male brain
2 chr1:149910000-149934200 Weak transcription Primary T cells from cord blood blood
3 chr1:149911400-149933800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr1:149912600-149941600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:149912800-149933800 Weak transcription Stomach Mucosa stomach
6 chr1:149914400-149937400 Weak transcription Fetal Heart heart
7 chr1:149915000-149937600 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr1:149921200-149942600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:149922200-149935800 Weak transcription Pancreas Pancrea
10 chr1:149922200-149936000 Weak transcription Thymus Thymus
11 chr1:149922200-149937400 Weak transcription Colonic Mucosa Colon
12 chr1:149922200-149937600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:149922400-149934400 Weak transcription Psoas Muscle Psoas
14 chr1:149922400-149951600 Weak transcription Small Intestine intestine
15 chr1:149927400-149934000 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:149928200-149934400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:149928400-149932200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:149928400-149933800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr1:149928400-149934200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:149928400-149934200 Strong transcription Adipose Nuclei Adipose
21 chr1:149929000-149934200 Strong transcription Fetal Adrenal Gland Adrenal Gland
22 chr1:149929200-149932200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:149929400-149932200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
24 chr1:149929400-149932200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
25 chr1:149929400-149932200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
26 chr1:149929400-149932200 Strong transcription Primary T cells fromperipheralblood blood
27 chr1:149929400-149932200 Strong transcription Liver Liver
28 chr1:149929400-149932200 Strong transcription Brain Inferior Temporal Lobe brain
29 chr1:149929400-149932200 Strong transcription Brain Substantia Nigra brain
30 chr1:149929400-149933600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:149929400-149933800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr1:149929400-149933800 Strong transcription Duodenum Mucosa Duodenum
33 chr1:149929400-149934200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:149929400-149940000 Strong transcription Skeletal Muscle Female skeletal muscle
35 chr1:149929400-149948400 Strong transcription Rectal Mucosa Donor 29 rectum
36 chr1:149929600-149932200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr1:149929600-149932200 Strong transcription Duodenum Smooth Muscle Duodenum
38 chr1:149929600-149932200 Strong transcription Rectal Mucosa Donor 31 rectum
39 chr1:149929600-149932800 Strong transcription Brain Anterior Caudate brain
40 chr1:149929600-149933400 Strong transcription Brain Hippocampus Middle brain
41 chr1:149929600-149940200 Strong transcription HUVEC blood vessel
42 chr1:149929600-149950200 Strong transcription Osteobl bone
43 chr1:149929800-149932400 Strong transcription GM12878-XiMat blood
44 chr1:149929800-149933200 Strong transcription HSMM muscle
45 chr1:149929800-149933800 Strong transcription Brain Cingulate Gyrus brain
46 chr1:149929800-149933800 Strong transcription HSMMtube muscle
47 chr1:149929800-149936000 Strong transcription NH-A brain
48 chr1:149930000-149932200 Strong transcription Placenta Placenta
49 chr1:149930000-149933800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr1:149930000-149935200 Strong transcription Hela-S3 cervix

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Last update: Aug 31, 2015