Variant report
| Variant | rs55705001 |
|---|---|
| Chromosome Location | chr1:149897528-149897529 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:149890000-149898800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 2 | chr1:149890400-149897600 | Weak transcription | Fetal Brain Male | brain |
| 3 | chr1:149890800-149898000 | Weak transcription | Stomach Mucosa | stomach |
| 4 | chr1:149893000-149897600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 5 | chr1:149893400-149897600 | Strong transcription | HSMM | muscle |
| 6 | chr1:149893400-149898200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 7 | chr1:149893400-149898200 | Strong transcription | Thymus | Thymus |
| 8 | chr1:149893600-149897600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr1:149893600-149897600 | Strong transcription | Primary B cells from cord blood | blood |
| 10 | chr1:149893600-149897600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 11 | chr1:149893600-149897600 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 12 | chr1:149893600-149897600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 13 | chr1:149893600-149897800 | Strong transcription | Duodenum Mucosa | Duodenum |
| 14 | chr1:149893600-149897800 | Strong transcription | Fetal Muscle Trunk | muscle |
| 15 | chr1:149893600-149898000 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 16 | chr1:149893600-149898000 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 17 | chr1:149893600-149898000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 18 | chr1:149893600-149898000 | Strong transcription | Osteobl | bone |
| 19 | chr1:149893600-149898200 | Strong transcription | NH-A | brain |
| 20 | chr1:149893600-149898400 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 21 | chr1:149893800-149897600 | Strong transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 22 | chr1:149893800-149897600 | Strong transcription | Placenta | Placenta |
| 23 | chr1:149893800-149897600 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 24 | chr1:149894000-149897800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 25 | chr1:149894000-149898200 | Strong transcription | NHDF-Ad | bronchial |
| 26 | chr1:149894200-149897600 | Strong transcription | Brain Hippocampus Middle | brain |
| 27 | chr1:149894200-149897600 | Strong transcription | Left Ventricle | heart |
| 28 | chr1:149894200-149897800 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 29 | chr1:149894200-149898000 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 30 | chr1:149894200-149898000 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 31 | chr1:149894200-149898000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 32 | chr1:149894200-149898000 | Strong transcription | Fetal Intestine Large | intestine |
| 33 | chr1:149894200-149898000 | Strong transcription | Fetal Thymus | thymus |
| 34 | chr1:149894200-149898200 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 35 | chr1:149894400-149897600 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 36 | chr1:149894400-149897600 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 37 | chr1:149894400-149897600 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 38 | chr1:149894400-149897600 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 39 | chr1:149894400-149897600 | Strong transcription | HepG2 | liver |
| 40 | chr1:149894400-149897600 | Strong transcription | K562 | blood |
| 41 | chr1:149894400-149897600 | Strong transcription | NHLF | lung |
| 42 | chr1:149894400-149897800 | Strong transcription | Brain Cingulate Gyrus | brain |
| 43 | chr1:149894400-149897800 | Strong transcription | Ovary | ovary |
| 44 | chr1:149894400-149898000 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 45 | chr1:149894400-149898000 | Strong transcription | Primary hematopoietic stem cells | blood |
| 46 | chr1:149894400-149898000 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 47 | chr1:149894400-149898000 | Strong transcription | Fetal Muscle Leg | muscle |
| 48 | chr1:149894400-149898000 | Strong transcription | Placenta Amnion | Placenta Amnion |
| 49 | chr1:149894400-149898000 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 50 | chr1:149894400-149898000 | Strong transcription | Rectal Smooth Muscle | rectum |
