The 2.0 version of rSNPBase

Variant report

Variant rs72692837
Chromosome Location chr1:149987939-149987940
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149982800-149994400 Weak transcription Gastric stomach
2 chr1:149983000-149992800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:149983400-149988800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr1:149983400-149988800 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr1:149983400-149989000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:149983400-149989400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr1:149983400-149989400 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr1:149985000-149989400 Weak transcription Hela-S3 cervix
9 chr1:149985000-149989600 Weak transcription Colonic Mucosa Colon
10 chr1:149985000-149993200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:149985200-149988800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr1:149985200-149989000 Weak transcription Stomach Mucosa stomach
13 chr1:149985200-149989400 Weak transcription GM12878-XiMat blood
14 chr1:149985200-149993200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:149985400-149988800 Weak transcription Fetal Intestine Large intestine
16 chr1:149985400-149988800 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr1:149985400-149989600 Weak transcription Brain Cingulate Gyrus brain
18 chr1:149985400-149990200 Weak transcription Brain Anterior Caudate brain
19 chr1:149985400-149993000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:149985600-149989000 Weak transcription Fetal Intestine Small intestine
21 chr1:149985600-149994000 Weak transcription Brain Hippocampus Middle brain
22 chr1:149985600-150022000 Weak transcription Brain Substantia Nigra brain
23 chr1:149986200-149990400 Enhancers Placenta Placenta
24 chr1:149986600-149988200 Enhancers K562 blood
25 chr1:149986800-149989000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:149987000-149988200 Enhancers Adipose Nuclei Adipose
27 chr1:149987400-149988000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:149987400-149989800 Enhancers Placenta Amnion Placenta Amnion
29 chr1:149987600-149988000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:149987600-149988000 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr1:149987600-149988200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:149987600-149988200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
33 chr1:149987600-149988200 Enhancers A549 lung
34 chr1:149987600-149988200 Enhancers Osteobl bone
35 chr1:149987800-149988000 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015