The 2.0 version of rSNPBase

Variant report

Variant rs11587963
Chromosome Location chr1:150106554-150106555
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150040400-150121400 Weak transcription Pancreas Pancrea
2 chr1:150041000-150114400 Weak transcription Right Ventricle heart
3 chr1:150052000-150116800 Weak transcription Spleen Spleen
4 chr1:150055000-150120800 Weak transcription Aorta Aorta
5 chr1:150061000-150116800 Weak transcription Ovary ovary
6 chr1:150067000-150113200 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr1:150067400-150121200 Weak transcription Colonic Mucosa Colon
8 chr1:150069000-150113800 Weak transcription Fetal Kidney kidney
9 chr1:150069000-150121000 Weak transcription NHLF lung
10 chr1:150071000-150121000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:150071200-150120600 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr1:150072400-150121000 Weak transcription Brain Angular Gyrus brain
13 chr1:150077200-150113000 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:150077400-150112800 Weak transcription Fetal Heart heart
15 chr1:150079200-150121000 Weak transcription Thymus Thymus
16 chr1:150083200-150116400 Weak transcription Primary hematopoietic stem cells blood
17 chr1:150083600-150120800 Weak transcription Brain Hippocampus Middle brain
18 chr1:150084000-150110600 Weak transcription Stomach Smooth Muscle stomach
19 chr1:150085400-150116400 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr1:150085400-150119000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:150085400-150120800 Weak transcription NH-A brain
22 chr1:150085400-150121200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:150085400-150121200 Weak transcription Psoas Muscle Psoas
24 chr1:150085600-150121200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:150085800-150121000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr1:150086800-150116400 Weak transcription Left Ventricle heart
27 chr1:150087000-150107600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:150087000-150116400 Weak transcription Primary monocytes fromperipheralblood blood
29 chr1:150087000-150118400 Weak transcription Fetal Intestine Large intestine
30 chr1:150087000-150121200 Weak transcription Esophagus oesophagus
31 chr1:150087000-150121200 Weak transcription Placenta Placenta
32 chr1:150087200-150107400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:150087400-150116800 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr1:150087800-150110200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:150087800-150113800 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:150087800-150118600 Weak transcription Dnd41 blood
37 chr1:150087800-150120800 Weak transcription Brain Anterior Caudate brain
38 chr1:150087800-150121000 Weak transcription Brain Inferior Temporal Lobe brain
39 chr1:150088000-150111400 Weak transcription GM12878-XiMat blood
40 chr1:150088000-150113800 Weak transcription HSMMtube muscle
41 chr1:150088000-150120800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:150088000-150120800 Weak transcription Fetal Muscle Trunk muscle
43 chr1:150088600-150107600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:150088800-150111000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:150091000-150116800 Weak transcription Primary T cells fromperipheralblood blood
46 chr1:150091200-150116600 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr1:150091200-150120400 Weak transcription Colon Smooth Muscle Colon
48 chr1:150091400-150119200 Weak transcription Brain Germinal Matrix brain
49 chr1:150091400-150121000 Weak transcription Duodenum Mucosa Duodenum
50 chr1:150091600-150106800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015