The 2.0 version of rSNPBase

Variant report

Variant rs942453
Chromosome Location chr1:150257262-150257263
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150254400-150260600 Weak transcription K562 blood
2 chr1:150254600-150266200 Weak transcription Small Intestine intestine
3 chr1:150255400-150265400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:150255400-150265800 Weak transcription HSMMtube muscle
5 chr1:150255400-150266200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:150255600-150265800 Weak transcription Aorta Aorta
7 chr1:150255800-150258800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:150255800-150258800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:150255800-150258800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:150255800-150259000 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:150255800-150265400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:150255800-150266000 Weak transcription Gastric stomach
13 chr1:150256000-150258600 Weak transcription NHLF lung
14 chr1:150256000-150258800 Weak transcription H9 Cell Line embryonic stem cell
15 chr1:150256000-150258800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:150256000-150258800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:150256000-150258800 Weak transcription Adipose Nuclei Adipose
18 chr1:150256000-150258800 Weak transcription Esophagus oesophagus
19 chr1:150256000-150258800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:150256000-150259000 Weak transcription Fetal Stomach stomach
21 chr1:150256000-150265400 Weak transcription Duodenum Mucosa Duodenum
22 chr1:150256000-150265400 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr1:150256000-150265400 Weak transcription Fetal Lung lung
24 chr1:150256000-150265400 Weak transcription Psoas Muscle Psoas
25 chr1:150256000-150265400 Weak transcription Right Ventricle heart
26 chr1:150256000-150265400 Weak transcription NHEK skin
27 chr1:150256000-150265600 Weak transcription NH-A brain
28 chr1:150256000-150265800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:150256000-150265800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:150256000-150266000 Weak transcription Pancreas Pancrea
31 chr1:150256200-150257400 Genic enhancers Skeletal Muscle Female skeletal muscle
32 chr1:150256200-150258000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:150256200-150258600 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr1:150256200-150258600 Weak transcription Fetal Intestine Large intestine
35 chr1:150256200-150258800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:150256200-150258800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr1:150256200-150258800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr1:150256200-150258800 Weak transcription Brain Angular Gyrus brain
39 chr1:150256200-150258800 Weak transcription Brain Cingulate Gyrus brain
40 chr1:150256200-150258800 Weak transcription Fetal Brain Female brain
41 chr1:150256200-150258800 Weak transcription Osteobl bone
42 chr1:150256200-150259000 Weak transcription Fetal Muscle Trunk muscle
43 chr1:150256200-150265200 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr1:150256200-150265400 Weak transcription Brain Germinal Matrix brain
45 chr1:150256200-150265400 Weak transcription Fetal Muscle Leg muscle
46 chr1:150256200-150265400 Weak transcription Rectal Smooth Muscle rectum
47 chr1:150256200-150265600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:150256200-150265600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr1:150256200-150265800 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr1:150256200-150265800 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015