The 2.0 version of rSNPBase

Variant report

Variant rs34755378
Chromosome Location chr1:150242340-150242341
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150239800-150242600 Active TSS iPS-20b Cell Line embryonic stem cell
2 chr1:150240000-150242400 Active TSS H9 Cell Line embryonic stem cell
3 chr1:150240000-150242400 Active TSS iPS-15b Cell Line embryonic stem cell
4 chr1:150240000-150242400 Active TSS iPS-18 Cell Line embryonic stem cell
5 chr1:150240000-150242600 Active TSS HUES48 Cell Line embryonic stem cell
6 chr1:150240200-150242400 Active TSS HUES64 Cell Line embryonic stem cell
7 chr1:150240600-150242400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr1:150240800-150242400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:150240800-150242400 Active TSS Brain Anterior Caudate brain
10 chr1:150240800-150242400 Active TSS Brain Hippocampus Middle brain
11 chr1:150240800-150242400 Active TSS Rectal Mucosa Donor 29 rectum
12 chr1:150240800-150242600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:150241200-150242400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:150241400-150242400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:150241600-150242400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:150241600-150242600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:150241600-150242600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
18 chr1:150241800-150242400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr1:150241800-150244600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:150241800-150244800 Weak transcription Aorta Aorta
21 chr1:150241800-150245200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:150241800-150245200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr1:150241800-150245400 Weak transcription Lung lung
24 chr1:150241800-150253400 Weak transcription Ovary ovary
25 chr1:150241800-150253800 Weak transcription Esophagus oesophagus
26 chr1:150241800-150253800 Weak transcription Gastric stomach
27 chr1:150241800-150254200 Weak transcription Spleen Spleen
28 chr1:150242000-150242400 Enhancers Primary T cells fromperipheralblood blood
29 chr1:150242000-150242400 Enhancers Primary T helper cells fromperipheralblood blood
30 chr1:150242000-150242400 Enhancers Primary Natural Killer cells fromperipheralblood blood
31 chr1:150242000-150242400 Enhancers Adipose Nuclei Adipose
32 chr1:150242000-150242400 Enhancers Colonic Mucosa Colon
33 chr1:150242000-150242400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
34 chr1:150242000-150242400 Enhancers Fetal Lung lung
35 chr1:150242000-150242400 Enhancers Placenta Amnion Placenta Amnion
36 chr1:150242000-150242400 Enhancers Sigmoid Colon Sigmoid Colon
37 chr1:150242000-150242400 Enhancers HepG2 liver
38 chr1:150242000-150242600 Enhancers Primary B cells from peripheral blood blood
39 chr1:150242000-150242600 Enhancers Skeletal Muscle Male skeletal muscle
40 chr1:150242000-150243800 Weak transcription K562 blood
41 chr1:150242000-150244000 Weak transcription Fetal Kidney kidney
42 chr1:150242000-150244600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr1:150242000-150244600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:150242000-150244600 Weak transcription Muscle Satellite Cultured Cells --
45 chr1:150242000-150244600 Weak transcription Rectal Smooth Muscle rectum
46 chr1:150242000-150244600 Weak transcription Stomach Smooth Muscle stomach
47 chr1:150242000-150244600 Weak transcription NHDF-Ad bronchial
48 chr1:150242000-150244800 Weak transcription Placenta Placenta
49 chr1:150242000-150244800 Weak transcription NH-A brain
50 chr1:150242000-150245200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015