The 2.0 version of rSNPBase

Variant report

Variant rs12142331
Chromosome Location chr1:150331232-150331233
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150295200-150331800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr1:150305600-150336200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:150308200-150335600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:150314000-150335200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:150319000-150335200 Weak transcription Stomach Mucosa stomach
6 chr1:150319200-150335600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:150320200-150333800 Weak transcription HepG2 liver
8 chr1:150320200-150335400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:150320200-150335400 Weak transcription Right Ventricle heart
10 chr1:150320200-150336200 Weak transcription Gastric stomach
11 chr1:150320800-150335000 Weak transcription Psoas Muscle Psoas
12 chr1:150322400-150332400 Strong transcription Fetal Intestine Small intestine
13 chr1:150324800-150335400 Weak transcription Colonic Mucosa Colon
14 chr1:150325600-150335600 Weak transcription Small Intestine intestine
15 chr1:150326000-150335400 Weak transcription Brain Substantia Nigra brain
16 chr1:150326200-150335000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr1:150326200-150335200 Weak transcription Brain Angular Gyrus brain
18 chr1:150326200-150335200 Weak transcription Brain Inferior Temporal Lobe brain
19 chr1:150326200-150335200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:150326200-150335200 Weak transcription Pancreas Pancrea
21 chr1:150326200-150335200 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr1:150326200-150335400 Weak transcription Muscle Satellite Cultured Cells --
23 chr1:150326200-150335400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:150326200-150335400 Weak transcription Brain Hippocampus Middle brain
25 chr1:150326200-150335600 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr1:150326200-150335600 Weak transcription Aorta Aorta
27 chr1:150326200-150336000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr1:150326400-150334400 Weak transcription K562 blood
29 chr1:150326400-150334800 Weak transcription Dnd41 blood
30 chr1:150326400-150335200 Weak transcription Fetal Brain Male brain
31 chr1:150326400-150335200 Weak transcription Fetal Kidney kidney
32 chr1:150326400-150335400 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr1:150326400-150335400 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr1:150326400-150335400 Weak transcription Brain Anterior Caudate brain
35 chr1:150326600-150335000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr1:150326600-150335000 Weak transcription Hela-S3 cervix
37 chr1:150326600-150335200 Weak transcription Primary hematopoietic stem cells blood
38 chr1:150326600-150335200 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr1:150326600-150335200 Weak transcription Fetal Lung lung
40 chr1:150326600-150335200 Weak transcription Rectal Smooth Muscle rectum
41 chr1:150326600-150335200 Weak transcription GM12878-XiMat blood
42 chr1:150326600-150335200 Weak transcription NHEK skin
43 chr1:150326600-150335400 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr1:150326600-150335400 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr1:150326600-150335400 Weak transcription Brain Cingulate Gyrus brain
46 chr1:150326600-150335400 Weak transcription NHLF lung
47 chr1:150326600-150335600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:150326600-150335600 Weak transcription Primary B cells from cord blood blood
49 chr1:150326600-150335600 Weak transcription Colon Smooth Muscle Colon
50 chr1:150326800-150335400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015