The 2.0 version of rSNPBase

Variant report

Variant rs12119250
Chromosome Location chr1:150528885-150528886
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150521600-150532600 Weak transcription Brain Angular Gyrus brain
2 chr1:150522400-150532800 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr1:150522600-150530200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr1:150522600-150531200 Weak transcription Brain Substantia Nigra brain
5 chr1:150522600-150532200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:150522800-150532200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:150524000-150532600 Weak transcription Primary T cells from cord blood blood
8 chr1:150524600-150532000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:150524600-150532600 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr1:150524600-150532600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr1:150524800-150531800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr1:150524800-150532200 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr1:150525000-150531000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:150525400-150531200 Genic enhancers Placenta Placenta
15 chr1:150525400-150531600 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:150525400-150532200 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr1:150525400-150532200 Weak transcription Brain Anterior Caudate brain
18 chr1:150525400-150532600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:150525400-150532600 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr1:150525400-150532600 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr1:150525400-150532600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr1:150525400-150532600 Weak transcription Psoas Muscle Psoas
23 chr1:150525400-150533600 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr1:150525600-150532000 Weak transcription Fetal Thymus thymus
25 chr1:150525600-150533400 Weak transcription Brain Germinal Matrix brain
26 chr1:150525800-150530000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr1:150525800-150531800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:150525800-150532400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:150525800-150532400 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr1:150525800-150532600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:150525800-150532600 Weak transcription A549 lung
32 chr1:150526000-150530800 Weak transcription HUVEC blood vessel
33 chr1:150526000-150531200 Strong transcription Fetal Stomach stomach
34 chr1:150526000-150531800 Weak transcription Right Atrium heart
35 chr1:150526000-150532000 Strong transcription Fetal Intestine Small intestine
36 chr1:150526000-150532400 Weak transcription HSMM muscle
37 chr1:150526000-150532400 Weak transcription Osteobl bone
38 chr1:150526200-150530000 Strong transcription Lung lung
39 chr1:150526200-150530800 Strong transcription NHLF lung
40 chr1:150526200-150531400 Weak transcription Primary B cells from cord blood blood
41 chr1:150526200-150532200 Weak transcription Stomach Mucosa stomach
42 chr1:150526200-150532400 Weak transcription Muscle Satellite Cultured Cells --
43 chr1:150526200-150533400 Weak transcription Fetal Brain Male brain
44 chr1:150526400-150530800 Weak transcription HMEC breast
45 chr1:150526400-150531800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:150526600-150530800 Strong transcription Liver Liver
47 chr1:150526600-150531800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr1:150526800-150529000 Strong transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:150526800-150532400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr1:150527000-150530800 Strong transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015