The 2.0 version of rSNPBase

Variant report

Variant rs41266927
Chromosome Location chr1:150636317-150636318
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150603200-150661200 Weak transcription Brain Substantia Nigra brain
2 chr1:150603400-150668200 Weak transcription Brain Germinal Matrix brain
3 chr1:150608600-150668600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:150618800-150660400 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:150619200-150637800 Weak transcription Fetal Heart heart
6 chr1:150621000-150640400 Weak transcription Small Intestine intestine
7 chr1:150621000-150660800 Weak transcription Colon Smooth Muscle Colon
8 chr1:150621200-150660400 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:150621200-150664800 Weak transcription Fetal Brain Female brain
10 chr1:150621200-150665000 Weak transcription Fetal Kidney kidney
11 chr1:150621200-150669400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:150621400-150637000 Weak transcription Fetal Brain Male brain
13 chr1:150621400-150639400 Weak transcription HepG2 liver
14 chr1:150621400-150644200 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:150621400-150660400 Weak transcription HSMM muscle
16 chr1:150621600-150639600 Weak transcription Muscle Satellite Cultured Cells --
17 chr1:150621800-150661200 Weak transcription NHDF-Ad bronchial
18 chr1:150621800-150668600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:150622000-150661400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:150622000-150668600 Weak transcription HSMMtube muscle
21 chr1:150622000-150669400 Weak transcription Esophagus oesophagus
22 chr1:150622200-150660600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:150622800-150637000 Weak transcription Brain Cingulate Gyrus brain
24 chr1:150623200-150640800 Weak transcription Gastric stomach
25 chr1:150623200-150642200 Weak transcription Right Ventricle heart
26 chr1:150623200-150648400 Weak transcription Lung lung
27 chr1:150623200-150668600 Weak transcription Brain Angular Gyrus brain
28 chr1:150623400-150663000 Weak transcription Rectal Smooth Muscle rectum
29 chr1:150627000-150640600 Weak transcription Stomach Mucosa stomach
30 chr1:150627400-150638800 Weak transcription Pancreas Pancrea
31 chr1:150629400-150636400 Strong transcription Rectal Mucosa Donor 29 rectum
32 chr1:150629400-150636600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:150629800-150636600 Strong transcription Primary T helper cells fromperipheralblood blood
34 chr1:150629800-150636600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:150630000-150636400 Strong transcription Fetal Muscle Leg muscle
36 chr1:150630000-150664800 Weak transcription Thymus Thymus
37 chr1:150630400-150636400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr1:150630600-150636400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:150630800-150636400 Strong transcription Fetal Thymus thymus
40 chr1:150630800-150638000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:150630800-150656200 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr1:150631400-150645000 Weak transcription Primary hematopoietic stem cells blood
43 chr1:150631600-150636600 Strong transcription Fetal Stomach stomach
44 chr1:150631600-150640800 Strong transcription Fetal Intestine Small intestine
45 chr1:150631800-150665400 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr1:150632200-150636400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:150632200-150636600 Strong transcription HUES48 Cell Line embryonic stem cell
48 chr1:150632200-150636600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:150632400-150669000 Weak transcription Aorta Aorta
50 chr1:150632600-150636400 Strong transcription Placenta Placenta

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Last update: Aug 31, 2015