The 2.0 version of rSNPBase

Variant report

Variant rs11205386
Chromosome Location chr1:150481738-150481739
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150461000-150486800 Weak transcription Fetal Heart heart
2 chr1:150462000-150485800 Strong transcription Breast Myoepithelial Primary Cells Breast
3 chr1:150468800-150483800 Strong transcription Brain Germinal Matrix brain
4 chr1:150471800-150487400 Weak transcription Fetal Brain Male brain
5 chr1:150474400-150482000 Strong transcription Primary T cells from cord blood blood
6 chr1:150475000-150485400 Strong transcription Fetal Brain Female brain
7 chr1:150476200-150486200 Strong transcription Ovary ovary
8 chr1:150477800-150487400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr1:150478200-150487400 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr1:150478800-150487200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:150478800-150487400 Weak transcription Psoas Muscle Psoas
12 chr1:150478800-150487600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:150479000-150484200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:150479000-150487400 Weak transcription Fetal Lung lung
15 chr1:150479000-150487600 Weak transcription Aorta Aorta
16 chr1:150479400-150482800 Weak transcription GM12878-XiMat blood
17 chr1:150479400-150483400 Weak transcription Gastric stomach
18 chr1:150479400-150487400 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr1:150479400-150487600 Weak transcription Fetal Kidney kidney
20 chr1:150479600-150481800 Weak transcription Brain Substantia Nigra brain
21 chr1:150479600-150483800 Weak transcription Pancreas Pancrea
22 chr1:150479600-150487200 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr1:150479600-150487200 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr1:150479600-150487400 Weak transcription H9 Cell Line embryonic stem cell
25 chr1:150479600-150487400 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr1:150479600-150487400 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr1:150479600-150487400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr1:150479600-150487400 Weak transcription Primary hematopoietic stem cells blood
29 chr1:150479600-150487400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr1:150479600-150487400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr1:150479600-150487600 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr1:150479800-150482200 Enhancers Placenta Placenta
33 chr1:150479800-150485600 Weak transcription Fetal Thymus thymus
34 chr1:150479800-150487200 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:150479800-150487400 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr1:150479800-150487400 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr1:150480000-150482000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:150480000-150487200 Weak transcription Primary B cells from cord blood blood
39 chr1:150480000-150487200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr1:150480200-150481800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:150480200-150481800 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr1:150480200-150481800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:150480200-150481800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:150480200-150481800 Enhancers Placenta Amnion Placenta Amnion
45 chr1:150480200-150482000 Flanking Active TSS Muscle Satellite Cultured Cells --
46 chr1:150480200-150482000 Flanking Active TSS NHDF-Ad bronchial
47 chr1:150480200-150482200 Enhancers Lung lung
48 chr1:150480200-150482600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
49 chr1:150480200-150487200 Weak transcription H1 Cell Line embryonic stem cell
50 chr1:150480400-150481800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015