The 2.0 version of rSNPBase

Variant report

Variant rs12139286
Chromosome Location chr1:150262455-150262456
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150254600-150266200 Weak transcription Small Intestine intestine
2 chr1:150255400-150265400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr1:150255400-150265800 Weak transcription HSMMtube muscle
4 chr1:150255400-150266200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:150255600-150265800 Weak transcription Aorta Aorta
6 chr1:150255800-150265400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr1:150255800-150266000 Weak transcription Gastric stomach
8 chr1:150256000-150265400 Weak transcription Duodenum Mucosa Duodenum
9 chr1:150256000-150265400 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr1:150256000-150265400 Weak transcription Fetal Lung lung
11 chr1:150256000-150265400 Weak transcription Psoas Muscle Psoas
12 chr1:150256000-150265400 Weak transcription Right Ventricle heart
13 chr1:150256000-150265400 Weak transcription NHEK skin
14 chr1:150256000-150265600 Weak transcription NH-A brain
15 chr1:150256000-150265800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:150256000-150265800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:150256000-150266000 Weak transcription Pancreas Pancrea
18 chr1:150256200-150265200 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr1:150256200-150265400 Weak transcription Brain Germinal Matrix brain
20 chr1:150256200-150265400 Weak transcription Fetal Muscle Leg muscle
21 chr1:150256200-150265400 Weak transcription Rectal Smooth Muscle rectum
22 chr1:150256200-150265600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:150256200-150265600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:150256200-150265800 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr1:150256200-150265800 Weak transcription Fetal Intestine Small intestine
26 chr1:150256200-150265800 Weak transcription HMEC breast
27 chr1:150256200-150266000 Weak transcription Lung lung
28 chr1:150256200-150266000 Weak transcription Spleen Spleen
29 chr1:150256400-150265400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:150256400-150265600 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr1:150257000-150265400 Weak transcription Fetal Heart heart
32 chr1:150257200-150265600 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr1:150257400-150265600 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr1:150257600-150265600 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:150258400-150266000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr1:150259200-150265400 Weak transcription Fetal Intestine Large intestine
37 chr1:150259400-150265200 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr1:150259400-150265400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:150259400-150265400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:150259400-150265400 Weak transcription Brain Anterior Caudate brain
41 chr1:150259400-150265400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr1:150259400-150265400 Weak transcription Brain Substantia Nigra brain
43 chr1:150259400-150265400 Weak transcription Colon Smooth Muscle Colon
44 chr1:150259400-150265400 Weak transcription Fetal Stomach stomach
45 chr1:150259400-150265400 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr1:150259400-150265600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:150259400-150265600 Weak transcription NHDF-Ad bronchial
48 chr1:150259400-150265800 Weak transcription H9 Cell Line embryonic stem cell
49 chr1:150259400-150265800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr1:150259400-150265800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015