The 2.0 version of rSNPBase

Variant report

Variant rs72692898
Chromosome Location chr1:150049982-150049983
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150040000-150050200 Weak transcription Spleen Spleen
2 chr1:150040200-150090800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:150040400-150050000 Weak transcription Lung lung
4 chr1:150040400-150056400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:150040400-150061600 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr1:150040400-150078800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:150040400-150082800 Weak transcription Small Intestine intestine
8 chr1:150040400-150086800 Weak transcription Esophagus oesophagus
9 chr1:150040400-150121400 Weak transcription Pancreas Pancrea
10 chr1:150040600-150072200 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr1:150040600-150092000 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr1:150040800-150054400 Weak transcription Aorta Aorta
13 chr1:150041000-150053600 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr1:150041000-150064000 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:150041000-150114400 Weak transcription Right Ventricle heart
16 chr1:150041200-150054800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:150041400-150050000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:150041400-150053600 Weak transcription Fetal Kidney kidney
19 chr1:150041400-150055800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:150041400-150056000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:150041400-150066000 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr1:150041400-150067800 Weak transcription H9 Cell Line embryonic stem cell
23 chr1:150041400-150069200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:150041800-150058200 Strong transcription Osteobl bone
25 chr1:150042200-150050200 Weak transcription Left Ventricle heart
26 chr1:150042200-150051400 Weak transcription Fetal Heart heart
27 chr1:150042200-150073400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr1:150042200-150086600 Weak transcription Gastric stomach
29 chr1:150042400-150063200 Weak transcription NHEK skin
30 chr1:150042400-150067600 Weak transcription Psoas Muscle Psoas
31 chr1:150042600-150090800 Weak transcription Stomach Mucosa stomach
32 chr1:150043200-150060200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:150043400-150060400 Strong transcription HUES48 Cell Line embryonic stem cell
34 chr1:150043600-150051800 Strong transcription Liver Liver
35 chr1:150043600-150055200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:150044000-150050800 Strong transcription HUES64 Cell Line embryonic stem cell
37 chr1:150044200-150056000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:150044200-150056000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:150045200-150053600 Weak transcription HMEC breast
40 chr1:150045600-150058200 Strong transcription Fetal Lung lung
41 chr1:150045800-150051800 Strong transcription Fetal Muscle Trunk muscle
42 chr1:150045800-150052800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:150045800-150060000 Strong transcription Primary monocytes fromperipheralblood blood
44 chr1:150046000-150051600 Strong transcription Brain Angular Gyrus brain
45 chr1:150046000-150053400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr1:150046600-150056200 Strong transcription HUVEC blood vessel
47 chr1:150046600-150057600 Strong transcription Fetal Intestine Large intestine
48 chr1:150046600-150060000 Strong transcription Monocytes-CD14+_RO01746 blood
49 chr1:150046800-150050400 Weak transcription Fetal Stomach stomach
50 chr1:150047200-150050000 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015