The 2.0 version of rSNPBase

Variant report

Variant rs72692812
Chromosome Location chr1:149897966-149897967
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149890000-149898800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:149890800-149898000 Weak transcription Stomach Mucosa stomach
3 chr1:149893400-149898200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:149893400-149898200 Strong transcription Thymus Thymus
5 chr1:149893600-149898000 Strong transcription iPS-20b Cell Line embryonic stem cell
6 chr1:149893600-149898000 Strong transcription Primary hematopoietic stem cells short term culture blood
7 chr1:149893600-149898000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr1:149893600-149898000 Strong transcription Osteobl bone
9 chr1:149893600-149898200 Strong transcription NH-A brain
10 chr1:149893600-149898400 Strong transcription HUES48 Cell Line embryonic stem cell
11 chr1:149894000-149898200 Strong transcription NHDF-Ad bronchial
12 chr1:149894200-149898000 Strong transcription HUES6 Cell Line embryonic stem cell
13 chr1:149894200-149898000 Strong transcription Primary monocytes fromperipheralblood blood
14 chr1:149894200-149898000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:149894200-149898000 Strong transcription Fetal Intestine Large intestine
16 chr1:149894200-149898000 Strong transcription Fetal Thymus thymus
17 chr1:149894200-149898200 Strong transcription H1 Cell Line embryonic stem cell
18 chr1:149894400-149898000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr1:149894400-149898000 Strong transcription Primary hematopoietic stem cells blood
20 chr1:149894400-149898000 Strong transcription Brain Inferior Temporal Lobe brain
21 chr1:149894400-149898000 Strong transcription Fetal Muscle Leg muscle
22 chr1:149894400-149898000 Strong transcription Placenta Amnion Placenta Amnion
23 chr1:149894400-149898000 Strong transcription Rectal Mucosa Donor 31 rectum
24 chr1:149894400-149898000 Strong transcription Rectal Smooth Muscle rectum
25 chr1:149894400-149898200 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr1:149894400-149898200 Strong transcription Primary neutrophils fromperipheralblood blood
27 chr1:149894400-149898200 Strong transcription Rectal Mucosa Donor 29 rectum
28 chr1:149894400-149898400 Strong transcription iPS-18 Cell Line embryonic stem cell
29 chr1:149894400-149898600 Strong transcription H9 Cell Line embryonic stem cell
30 chr1:149894600-149898600 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr1:149894600-149898600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
32 chr1:149894800-149898000 Strong transcription Fetal Kidney kidney
33 chr1:149894800-149898200 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:149895200-149898000 Strong transcription iPS-15b Cell Line embryonic stem cell
35 chr1:149895400-149898400 Strong transcription ES-I3 Cell Line embryonic stem cell
36 chr1:149895800-149898600 Genic enhancers Primary T helper cells PMA-I stimulated --
37 chr1:149896400-149898200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:149896400-149898200 Genic enhancers Muscle Satellite Cultured Cells --
39 chr1:149896400-149898800 Genic enhancers Primary T helper cells fromperipheralblood blood
40 chr1:149896600-149898000 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:149896600-149898200 Genic enhancers Colon Smooth Muscle Colon
42 chr1:149896600-149898200 Genic enhancers HMEC breast
43 chr1:149896600-149898400 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:149896600-149898400 Genic enhancers Primary T helper naive cells fromperipheralblood blood
45 chr1:149896600-149898400 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:149896600-149898400 Transcr. at gene 5' and 3' GM12878-XiMat blood
47 chr1:149896600-149898600 Genic enhancers Primary T killer naive cells fromperipheralblood blood
48 chr1:149896600-149898800 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
49 chr1:149896600-149898800 Genic enhancers Primary T killer memory cells from peripheral blood blood
50 chr1:149896600-149898800 Genic enhancers Brain Angular Gyrus brain

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Last update: Aug 31, 2015