Variant report

Variant	rs10494363
Chromosome Location	chr1:149909495-149909496
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:93)
CpG islands
(count:0)
Chromatin interactive
region (count:18)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:93 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr1:149909368-149909620	MCF10A-Er-Src	breast:	n/a	n/a
2	POLR2A	chr1:149909169-149909654	ECC-1	luminal epithelium:	n/a	n/a
3	POLR2A	chr1:149908354-149910263	PANC-1	pancreas:	n/a	n/a
4	RAD21	chr1:149908771-149909575	Hela-S3	cervix:	n/a	n/a
5	POLR2A	chr1:149909253-149909547	H1-hESC	embryonic stem cell:	n/a	n/a
6	MAZ	chr1:149908587-149909721	Hela-S3	cervix:	n/a	n/a
7	POLR2A	chr1:149909319-149909588	A549	lung:	n/a	n/a
8	POLR2A	chr1:149908610-149909745	PFSK-1	brain:	n/a	n/a
9	GATA3	chr1:149908095-149909856	MCF-7	breast:	n/a	chr1:149908929-149908939
10	POLR2A	chr1:149909168-149909648	Hela-S3	cervix:	n/a	n/a
11	FOS	chr1:149909194-149910082	MCF10A-Er-Src	breast:	n/a	n/a
12	POLR2A	chr1:149909414-149909632	MCF-7	breast:	n/a	n/a
13	CTCF	chr1:149909420-149909570	HEEpiC	esophagus:	n/a	n/a
14	REST	chr1:149908919-149909726	A549	lung:	n/a	chr1:149909610-149909618 chr1:149909619-149909627 chr1:149909076-149909089
15	POLR2A	chr1:149909223-149909704	HCT-116	colon:	n/a	n/a
16	FOSL2	chr1:149909102-149909656	A549	lung:	n/a	chr1:149909136-149909145
17	SMC3	chr1:149909384-149909584	HepG2	liver:	n/a	n/a
18	POLR2A	chr1:149909233-149909622	A549	lung:	n/a	n/a
19	SMC3	chr1:149908574-149909849	Hela-S3	cervix:	n/a	n/a
20	POLR2A	chr1:149909200-149909630	HepG2	liver:	n/a	n/a
21	WRNIP1	chr1:149909376-149909528	GM12878	blood:	n/a	n/a
22	NFYA	chr1:149908869-149909612	Hela-S3	cervix:	n/a	n/a
23	POLR2A	chr1:149908540-149909674	Hela-S3	cervix:	n/a	n/a
24	E2F4	chr1:149909275-149909530	MCF10A-Er-Src	breast:	n/a	n/a
25	POLR2A	chr1:149909068-149909730	HCT-116	colon:	n/a	n/a
26	MYC	chr1:149909266-149909691	MCF10A-Er-Src	breast:	n/a	n/a
27	USF2	chr1:149908835-149909618	Hela-S3	cervix:	n/a	n/a
28	POLR2A	chr1:149907903-149909997	A549	lung:	n/a	n/a
29	JUND	chr1:149909184-149909575	K562	blood:	n/a	n/a
30	FOXA1	chr1:149909197-149909574	T-47D	breast:	n/a	n/a
31	TAF1	chr1:149909172-149909629	Hela-S3	cervix:	n/a	n/a
32	TCF7L2	chr1:149908358-149909661	HCT-116	colon:	n/a	n/a
33	POLR2A	chr1:149909200-149909631	H1-hESC	embryonic stem cell:	n/a	n/a
34	NFYB	chr1:149909186-149909591	K562	blood:	n/a	n/a
35	RCOR1	chr1:149909116-149909605	K562	blood:	n/a	n/a
36	POLR2A	chr1:149909288-149909592	H1-hESC	embryonic stem cell:	n/a	n/a
37	STAT3	chr1:149909197-149909642	Hela-S3	cervix:	n/a	chr1:149909479-149909488
38	POLR2A	chr1:149908993-149909956	Hela-S3	cervix:	n/a	n/a
39	KAP1	chr1:149909154-149909891	U2OS	brain:	n/a	n/a
40	POLR2A	chr1:149908391-149909803	K562	blood:	n/a	n/a
41	FOS	chr1:149909214-149909914	MCF10A-Er-Src	breast:	n/a	n/a
42	POLR2A	chr1:149908380-149910074	SK-N-SH	brain:	n/a	n/a
43	POLR2A	chr1:149909094-149909767	ECC-1	luminal epithelium:	n/a	n/a
44	MAZ	chr1:149909309-149909888	K562	blood:	n/a	n/a
45	STAT3	chr1:149909120-149909880	MCF10A-Er-Src	breast:	n/a	chr1:149909479-149909488 chr1:149909835-149909846 chr1:149909865-149909872
46	STAT3	chr1:149909137-149909830	MCF10A-Er-Src	breast:	n/a	chr1:149909479-149909488
47	POLR2A	chr1:149909024-149909740	PFSK-1	brain:	n/a	n/a
48	POLR2A	chr1:149908510-149910216	MCF-7	breast:	n/a	n/a
49	RFX5	chr1:149908419-149909664	Hela-S3	cervix:	n/a	n/a
50	STAT3	chr1:149908943-149909612	MCF10A-Er-Src	breast:	n/a	chr1:149909479-149909488 chr1:149909076-149909088

No data

(count:18 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:149908142..149911040-chr12:120728491..120730750,2	MCF-7	breast:
2	chr1:149815719..149822339-chr1:149907112..149913890,13	MCF-7	breast:
3	chr1:149908788..149910913-chr1:150337065..150338725,2	MCF-7	breast:
4	chr1:149908339..149915829-chr1:150035449..150039990,12	MCF-7	breast:
5	chr1:149908135..149909905-chr13:113655760..113657379,2	MCF-7	breast:
6	chr1:149909021..149910890-chr1:150157727..150159306,2	MCF-7	breast:
7	chr1:149909098..149913476-chr1:149978280..149982825,6	MCF-7	breast:
8	chr1:149908936..149911322-chr4:84348157..84349658,2	MCF-7	breast:
9	chr1:149908458..149914088-chr1:149980717..149984285,8	MCF-7	breast:
10	chr1:149907171..149915966-chr1:150036158..150043011,15	MCF-7	breast:
11	chr1:149909114..149911303-chr1:149929784..149931394,2	MCF-7	breast:
12	chr1:149908929..149910844-chr1:149992123..149994012,2	MCF-7	breast:
13	chr1:149814002..149823234-chr1:149906555..149912579,18	MCF-7	breast:
14	chr1:149907919..149910778-chr8:101963052..101964882,2	MCF-7	breast:
15	chr1:149909348..149911287-chr1:150133137..150136062,3	MCF-7	breast:
16	chr1:149907301..149909862-chr1:160001168..160003843,2	MCF-7	breast:
17	chr1:149907697..149909592-chr1:155223103..155225429,2	MCF-7	breast:
18	chr1:149908882..149909733-chr15:75315890..75316458,2	Hela-S3	cervix:

No data

Variant related genes	Relation type
MTMR11	TF binding region
ENSG00000163125	Chromatin interaction
ENSG00000220323	Chromatin interaction
ENSG00000202538	Chromatin interaction
ENSG00000163312	Chromatin interaction
ENSG00000261716	Chromatin interaction
ENSG00000160767	Chromatin interaction
ENSG00000163113	Chromatin interaction
ENSG00000203819	Chromatin interaction
ENSG00000126217	Chromatin interaction
ENSG00000136631	Chromatin interaction
ENSG00000203812	Chromatin interaction
ENSG00000183558	Chromatin interaction
ENSG00000138621	Chromatin interaction
ENSG00000164924	Chromatin interaction
ENSG00000272993	Chromatin interaction
ENSG00000143315	Chromatin interaction

Extended variants
information (count: 210 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:208)

rs_ID	r²[population]
rs1044808	0.84[EUR][1000 genomes]
rs1046332	1.00[GIH][hapmap]
rs10494261	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10494264	1.00[ASN][1000 genomes]
rs10749674	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs10888568	1.00[ASN][1000 genomes]
rs11205307	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11205308	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11205317	1.00[ASN][1000 genomes]
rs11205319	1.00[ASN][1000 genomes]
rs11205321	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11205326	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11205331	1.00[ASN][1000 genomes]
rs11205333	1.00[ASN][1000 genomes]
rs11577346	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11583720	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11584091	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11584354	1.00[ASN][1000 genomes]
rs11585955	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11587963	1.00[ASN][1000 genomes]
rs11589585	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11589922	1.00[ASN][1000 genomes]
rs11591200	1.00[ASN][1000 genomes]
rs12058090	1.00[ASN][1000 genomes]
rs12058502	1.00[ASN][1000 genomes]
rs12060027	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12060211	1.00[ASN][1000 genomes]
rs12060830	1.00[CHB][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];0.95[TSI][hapmap];1.00[ASN][1000 genomes]
rs12061196	1.00[ASN][1000 genomes]
rs12061565	1.00[ASN][1000 genomes]
rs12061856	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12062387	0.84[EUR][1000 genomes]
rs12062861	1.00[ASN][1000 genomes]
rs12063059	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12063281	1.00[ASN][1000 genomes]
rs12063329	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12065681	1.00[ASN][1000 genomes]
rs12066132	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12066293	1.00[ASN][1000 genomes]
rs12067422	1.00[ASN][1000 genomes]
rs12073359	1.00[ASN][1000 genomes]
rs12074281	1.00[ASN][1000 genomes]
rs12077623	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12078573	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12081082	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12087578	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12093499	1.00[ASN][1000 genomes]
rs12098106	1.00[ASN][1000 genomes]
rs12138231	1.00[ASN][1000 genomes]
rs1339494	1.00[ASN][1000 genomes]
rs1339495	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1349532	1.00[GIH][hapmap];0.82[MEX][hapmap];0.83[TSI][hapmap];0.84[EUR][1000 genomes]
rs1376675	0.84[EUR][1000 genomes]
rs1376676	1.00[GIH][hapmap];0.83[TSI][hapmap];0.84[EUR][1000 genomes]
rs1382573	1.00[ASN][1000 genomes]
rs1451641	0.84[EUR][1000 genomes]
rs1545762	1.00[ASN][1000 genomes]
rs15931	1.00[GIH][hapmap];0.82[MEX][hapmap];0.83[TSI][hapmap];0.83[EUR][1000 genomes]
rs16833149	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs16835135	1.00[GIH][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]
rs16836630	1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17581380	1.00[CHB][hapmap]
rs17643644	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1804775	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1824849	1.00[ASN][1000 genomes]
rs1824850	1.00[ASN][1000 genomes]
rs1964542	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1975957	1.00[ASN][1000 genomes]
rs2027349	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2039800	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2044891	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2198194	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2318763	1.00[ASN][1000 genomes]
rs2319280	1.00[ASN][1000 genomes]
rs28366567	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28443768	1.00[ASN][1000 genomes]
rs28560140	1.00[ASN][1000 genomes]
rs28660389	1.00[ASN][1000 genomes]
rs28753817	1.00[ASN][1000 genomes]
rs3208509	1.00[ASN][1000 genomes]
rs35230744	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3850838	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs3925724	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs4058847	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs41264630	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41265185	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41302101	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45548131	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4926406	1.00[CHB][hapmap]
rs4926407	1.00[ASN][1000 genomes]
rs4926408	1.00[ASN][1000 genomes]
rs4926411	1.00[ASN][1000 genomes]
rs4926412	1.00[ASN][1000 genomes]
rs55633017	0.84[EUR][1000 genomes]
rs55633125	1.00[ASN][1000 genomes]
rs55647342	1.00[ASN][1000 genomes]
rs55664407	0.84[EUR][1000 genomes]
rs55705001	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55802315	1.00[ASN][1000 genomes]
rs55840680	1.00[ASN][1000 genomes]
rs55840906	1.00[ASN][1000 genomes]
rs55885412	0.83[EUR][1000 genomes]
rs55909733	1.00[ASN][1000 genomes]
rs55918911	1.00[ASN][1000 genomes]
rs55963510	1.00[ASN][1000 genomes]
rs56119131	0.84[EUR][1000 genomes]
rs56125600	1.00[ASN][1000 genomes]
rs56139516	0.84[EUR][1000 genomes]
rs56188926	1.00[ASN][1000 genomes]
rs56212907	1.00[ASN][1000 genomes]
rs56229803	0.84[EUR][1000 genomes]
rs56265028	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56349882	1.00[ASN][1000 genomes]
rs56369603	1.00[ASN][1000 genomes]
rs58426216	1.00[ASN][1000 genomes]
rs59054339	1.00[ASN][1000 genomes]
rs59607464	1.00[ASN][1000 genomes]
rs61355654	0.84[EUR][1000 genomes]
rs6657062	1.00[ASN][1000 genomes]
rs6666959	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs6682495	0.93[EUR][1000 genomes]
rs6687454	1.00[ASN][1000 genomes]
rs67450539	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs68002561	0.85[EUR][1000 genomes]
rs68144650	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692803	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692804	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692805	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692807	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692808	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692810	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692811	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692812	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692813	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692814	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692816	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692818	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692819	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692834	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692835	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72692837	1.00[ASN][1000 genomes]
rs72692840	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72692842	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72692843	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72692849	1.00[ASN][1000 genomes]
rs72692851	1.00[ASN][1000 genomes]
rs72692854	1.00[ASN][1000 genomes]
rs72692857	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72692861	1.00[ASN][1000 genomes]
rs72692862	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72692865	1.00[ASN][1000 genomes]
rs72692866	1.00[ASN][1000 genomes]
rs72692869	1.00[ASN][1000 genomes]
rs72692886	1.00[ASN][1000 genomes]
rs72692893	1.00[ASN][1000 genomes]
rs72692895	1.00[ASN][1000 genomes]
rs72692896	1.00[ASN][1000 genomes]
rs72692897	1.00[ASN][1000 genomes]
rs72692898	1.00[ASN][1000 genomes]
rs72692899	1.00[ASN][1000 genomes]
rs72692900	1.00[ASN][1000 genomes]
rs72692901	1.00[ASN][1000 genomes]
rs72694905	1.00[ASN][1000 genomes]
rs72694906	1.00[ASN][1000 genomes]
rs72694908	1.00[ASN][1000 genomes]
rs72694914	1.00[ASN][1000 genomes]
rs72694915	1.00[ASN][1000 genomes]
rs72694917	1.00[ASN][1000 genomes]
rs72694918	1.00[ASN][1000 genomes]
rs72694919	1.00[ASN][1000 genomes]
rs72694923	1.00[ASN][1000 genomes]
rs72694926	1.00[ASN][1000 genomes]
rs72694927	1.00[ASN][1000 genomes]
rs72694928	1.00[ASN][1000 genomes]
rs72694933	1.00[ASN][1000 genomes]
rs72694936	1.00[ASN][1000 genomes]
rs72694942	1.00[ASN][1000 genomes]
rs72694944	1.00[ASN][1000 genomes]
rs72694945	1.00[ASN][1000 genomes]
rs72694946	1.00[ASN][1000 genomes]
rs72694950	1.00[ASN][1000 genomes]
rs72694951	1.00[ASN][1000 genomes]
rs72694953	1.00[ASN][1000 genomes]
rs72694956	1.00[ASN][1000 genomes]
rs72694957	1.00[ASN][1000 genomes]
rs72694959	1.00[ASN][1000 genomes]
rs72708148	0.83[EUR][1000 genomes]
rs72708149	0.83[EUR][1000 genomes]
rs72708150	0.83[EUR][1000 genomes]
rs72708151	0.84[EUR][1000 genomes]
rs72708152	0.84[EUR][1000 genomes]
rs72708153	0.84[EUR][1000 genomes]
rs72708157	0.84[EUR][1000 genomes]
rs72708158	0.87[EUR][1000 genomes]
rs72708162	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73008195	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7519918	1.00[ASN][1000 genomes]
rs7520930	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs7524797	0.87[EUR][1000 genomes]
rs7530922	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs7532876	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs7540847	1.00[ASN][1000 genomes]
rs7544531	1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[TSI][hapmap];1.00[ASN][1000 genomes]
rs7550323	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs7550350	1.00[CHB][hapmap]
rs7553622	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs7554367	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs9662055	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432820	chr1:148921404-149920927	Bivalent/Poised TSS Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Weak transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	784 gene(s)	inside rSNPs	diseases
2	nsv831537	chr1:149833357-150064655	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	431 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:149906400-149912000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr1:149907800-149909600	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
3	chr1:149907800-149909600	Flanking Active TSS	Stomach Mucosa	stomach
4	chr1:149907800-149909600	Flanking Active TSS	Osteobl	bone
5	chr1:149907800-149910000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
6	chr1:149907800-149910000	Flanking Active TSS	Hela-S3	cervix
7	chr1:149908200-149909600	Active TSS	ES-I3 Cell Line	embryonic stem cell
8	chr1:149908200-149909800	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
9	chr1:149908600-149909600	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
10	chr1:149908600-149910000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
11	chr1:149908600-149911600	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
12	chr1:149908800-149909600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr1:149908800-149909800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr1:149908800-149909800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr1:149908800-149909800	Flanking Active TSS	NHEK	skin
16	chr1:149908800-149910000	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
17	chr1:149908800-149910000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
18	chr1:149908800-149910000	Enhancers	Primary T cells from cord blood	blood
19	chr1:149908800-149910000	Enhancers	Lung	lung
20	chr1:149908800-149910000	Enhancers	Small Intestine	intestine
21	chr1:149908800-149910000	Flanking Active TSS	NHLF	lung
22	chr1:149908800-149910200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr1:149908800-149910200	Enhancers	Liver	Liver
24	chr1:149908800-149910200	Enhancers	Spleen	Spleen
25	chr1:149908800-149910800	Enhancers	Pancreas	Pancrea
26	chr1:149908800-149911000	Enhancers	Psoas Muscle	Psoas
27	chr1:149908800-149911400	Enhancers	Fetal Thymus	thymus
28	chr1:149908800-149912600	Weak transcription	Gastric	stomach
29	chr1:149909000-149909600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr1:149909000-149909600	Flanking Active TSS	Colon Smooth Muscle	Colon
31	chr1:149909000-149909800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr1:149909000-149909800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr1:149909000-149909800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr1:149909000-149910000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
35	chr1:149909000-149910000	Enhancers	Brain Cingulate Gyrus	brain
36	chr1:149909000-149910200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr1:149909000-149910200	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
38	chr1:149909000-149910200	Enhancers	HSMM	muscle
39	chr1:149909000-149910200	Enhancers	HSMMtube	muscle
40	chr1:149909000-149910600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr1:149909000-149910600	Enhancers	Sigmoid Colon	Sigmoid Colon
42	chr1:149909000-149910800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
43	chr1:149909000-149910800	Enhancers	Muscle Satellite Cultured Cells	--
44	chr1:149909000-149911400	Enhancers	Right Ventricle	heart
45	chr1:149909000-149911600	Enhancers	Primary hematopoietic stem cells short term culture	blood
46	chr1:149909000-149911800	Enhancers	Left Ventricle	heart
47	chr1:149909000-149912000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr1:149909000-149912000	Enhancers	Brain Angular Gyrus	brain
49	chr1:149909200-149909600	Flanking Active TSS	H9 Cell Line	embryonic stem cell
50	chr1:149909200-149909600	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell

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