The 2.0 version of rSNPBase

Variant report

Variant rs72692843
Chromosome Location chr1:149993392-149993393
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149982800-149994400 Weak transcription Gastric stomach
2 chr1:149985600-149994000 Weak transcription Brain Hippocampus Middle brain
3 chr1:149985600-150022000 Weak transcription Brain Substantia Nigra brain
4 chr1:149989600-149997800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:149989600-149998000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:149989800-149993400 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr1:149989800-149993400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:149989800-149993400 Weak transcription HMEC breast
9 chr1:149989800-149993600 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:149990000-149993400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr1:149990000-149993400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:149990000-149993600 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr1:149990600-149998000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr1:149991000-149996000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:149992600-149993400 Enhancers HepG2 liver
16 chr1:149992600-149994600 Enhancers Pancreas Pancrea
17 chr1:149992600-149995000 Enhancers Stomach Mucosa stomach
18 chr1:149992800-149993600 Enhancers Muscle Satellite Cultured Cells --
19 chr1:149992800-149993800 Enhancers HSMM muscle
20 chr1:149992800-149993800 Enhancers HUVEC blood vessel
21 chr1:149992800-149994000 Enhancers Adipose Nuclei Adipose
22 chr1:149992800-149994000 Enhancers A549 lung
23 chr1:149992800-149994200 Enhancers Lung lung
24 chr1:149992800-149994200 Enhancers Rectal Mucosa Donor 31 rectum
25 chr1:149992800-149995200 Enhancers Fetal Intestine Large intestine
26 chr1:149992800-149995200 Enhancers Fetal Intestine Small intestine
27 chr1:149993000-149993400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:149993200-149993400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:149993200-149993400 Enhancers Esophagus oesophagus
30 chr1:149993200-149993400 Enhancers K562 blood
31 chr1:149993200-149993600 Weak transcription Liver Liver
32 chr1:149993200-149993600 Active TSS Rectal Mucosa Donor 29 rectum
33 chr1:149993200-149993600 Enhancers Skeletal Muscle Female skeletal muscle
34 chr1:149993200-149993600 Enhancers NH-A brain
35 chr1:149993200-149993600 Enhancers NHLF lung
36 chr1:149993200-149993600 Enhancers Osteobl bone
37 chr1:149993200-149993800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:149993200-149993800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:149993200-149993800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:149993200-149993800 Flanking Active TSS Hela-S3 cervix
41 chr1:149993200-149994000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr1:149993200-149994000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:149993200-149994200 Enhancers Skeletal Muscle Male skeletal muscle
44 chr1:149993200-149994600 Enhancers Placenta Placenta
45 chr1:149993200-149994800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:149993200-149995000 Enhancers NHEK skin

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Last update: Aug 31, 2015