The 2.0 version of rSNPBase

Variant report

Variant rs59607464
Chromosome Location chr1:150130081-150130082
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150123200-150135400 Weak transcription A549 lung
2 chr1:150123400-150134400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:150123400-150134400 Weak transcription NHEK skin
4 chr1:150123800-150131200 Weak transcription Pancreas Pancrea
5 chr1:150123800-150134200 Weak transcription HMEC breast
6 chr1:150123800-150134600 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr1:150124200-150131000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:150124400-150132000 Genic enhancers Primary B cells from peripheral blood blood
9 chr1:150124400-150133400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr1:150124600-150130800 Strong transcription Fetal Muscle Trunk muscle
11 chr1:150124600-150133000 Strong transcription H9 Cell Line embryonic stem cell
12 chr1:150124600-150133200 Strong transcription HUES48 Cell Line embryonic stem cell
13 chr1:150124600-150133200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:150124800-150132400 Strong transcription Fetal Intestine Large intestine
15 chr1:150124800-150133200 Strong transcription iPS-18 Cell Line embryonic stem cell
16 chr1:150125000-150132000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:150125200-150131800 Genic enhancers Primary B cells from cord blood blood
18 chr1:150125200-150132400 Genic enhancers Primary T helper cells fromperipheralblood blood
19 chr1:150125200-150132800 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr1:150125200-150132800 Strong transcription iPS-20b Cell Line embryonic stem cell
21 chr1:150125200-150133000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:150125200-150133600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:150125400-150131200 Strong transcription HepG2 liver
24 chr1:150125400-150131400 Strong transcription Primary T regulatory cells fromperipheralblood blood
25 chr1:150125400-150131600 Strong transcription Fetal Intestine Small intestine
26 chr1:150125400-150133000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:150125400-150133200 Genic enhancers HSMM muscle
28 chr1:150125400-150133600 Genic enhancers NH-A brain
29 chr1:150125600-150132200 Genic enhancers HUVEC blood vessel
30 chr1:150125600-150132400 Strong transcription H1 Cell Line embryonic stem cell
31 chr1:150125600-150132400 Strong transcription HUES6 Cell Line embryonic stem cell
32 chr1:150125600-150132800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr1:150125600-150133200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:150125800-150130200 Strong transcription Thymus Thymus
35 chr1:150125800-150130400 Strong transcription Fetal Lung lung
36 chr1:150125800-150131000 Genic enhancers Primary monocytes fromperipheralblood blood
37 chr1:150125800-150131800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:150125800-150132000 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:150126200-150130200 Strong transcription Rectal Mucosa Donor 29 rectum
40 chr1:150126200-150132000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr1:150126200-150132400 Strong transcription Aorta Aorta
42 chr1:150126200-150132600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:150126400-150130200 Strong transcription Primary hematopoietic stem cells blood
44 chr1:150126400-150132200 Strong transcription Skeletal Muscle Male skeletal muscle
45 chr1:150126400-150133000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:150126600-150130600 Strong transcription Fetal Kidney kidney
47 chr1:150126600-150130600 Strong transcription HSMMtube muscle
48 chr1:150126600-150132600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr1:150126800-150130400 Strong transcription Spleen Spleen
50 chr1:150126800-150132200 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015