Variant report
| Variant | rs41302101 |
|---|---|
| Chromosome Location | chr1:149906167-149906168 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:149900400-149906400 | Genic enhancers | Fetal Intestine Small | intestine |
| 2 | chr1:149900400-149907800 | Weak transcription | Esophagus | oesophagus |
| 3 | chr1:149900400-149907800 | Weak transcription | Pancreas | Pancrea |
| 4 | chr1:149900400-149908400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr1:149900600-149906200 | Genic enhancers | Fetal Intestine Large | intestine |
| 6 | chr1:149900600-149906200 | Weak transcription | Left Ventricle | heart |
| 7 | chr1:149900600-149907600 | Weak transcription | Fetal Brain Male | brain |
| 8 | chr1:149900600-149907800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 9 | chr1:149900600-149908200 | Weak transcription | Right Ventricle | heart |
| 10 | chr1:149900600-149908400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 11 | chr1:149900800-149906400 | Weak transcription | Adipose Nuclei | Adipose |
| 12 | chr1:149900800-149907200 | Weak transcription | HepG2 | liver |
| 13 | chr1:149900800-149907600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 14 | chr1:149900800-149907600 | Weak transcription | Liver | Liver |
| 15 | chr1:149900800-149907800 | Weak transcription | Brain Germinal Matrix | brain |
| 16 | chr1:149900800-149907800 | Weak transcription | HSMM | muscle |
| 17 | chr1:149900800-149908000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 18 | chr1:149900800-149908200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 19 | chr1:149901000-149906200 | Strong transcription | Placenta | Placenta |
| 20 | chr1:149901000-149906600 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 21 | chr1:149901000-149907800 | Weak transcription | Brain Angular Gyrus | brain |
| 22 | chr1:149901200-149909000 | Weak transcription | GM12878-XiMat | blood |
| 23 | chr1:149901400-149906200 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 24 | chr1:149901400-149906200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 25 | chr1:149901600-149906200 | Strong transcription | Ovary | ovary |
| 26 | chr1:149901600-149906400 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 27 | chr1:149901600-149907400 | Weak transcription | Stomach Mucosa | stomach |
| 28 | chr1:149901600-149908200 | Weak transcription | Fetal Thymus | thymus |
| 29 | chr1:149901800-149906400 | Strong transcription | Brain Cingulate Gyrus | brain |
| 30 | chr1:149902200-149906600 | Strong transcription | Fetal Stomach | stomach |
| 31 | chr1:149902600-149907600 | Weak transcription | Brain Hippocampus Middle | brain |
| 32 | chr1:149903800-149906200 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 33 | chr1:149903800-149906200 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 34 | chr1:149903800-149906400 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 35 | chr1:149903800-149906600 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 36 | chr1:149903800-149907600 | Weak transcription | K562 | blood |
| 37 | chr1:149903800-149907800 | Weak transcription | NH-A | brain |
| 38 | chr1:149904000-149906200 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 39 | chr1:149904000-149906200 | Strong transcription | Brain Anterior Caudate | brain |
| 40 | chr1:149904000-149906400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 41 | chr1:149904000-149907000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 42 | chr1:149904000-149907200 | Weak transcription | Colon Smooth Muscle | Colon |
| 43 | chr1:149904000-149907800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 44 | chr1:149904000-149907800 | Weak transcription | Lung | lung |
| 45 | chr1:149904000-149907800 | Weak transcription | Hela-S3 | cervix |
| 46 | chr1:149904000-149908000 | Weak transcription | HUVEC | blood vessel |
| 47 | chr1:149904200-149906800 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 48 | chr1:149904200-149907400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 49 | chr1:149904200-149907800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 50 | chr1:149904200-149907800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
