The 2.0 version of rSNPBase

Variant report

Variant rs73008195
Chromosome Location chr1:149933006-149933007
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149909400-149947000 Weak transcription Fetal Brain Male brain
2 chr1:149910000-149934200 Weak transcription Primary T cells from cord blood blood
3 chr1:149911400-149933800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr1:149912600-149941600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:149912800-149933800 Weak transcription Stomach Mucosa stomach
6 chr1:149914400-149937400 Weak transcription Fetal Heart heart
7 chr1:149915000-149937600 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr1:149921200-149942600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:149922200-149935800 Weak transcription Pancreas Pancrea
10 chr1:149922200-149936000 Weak transcription Thymus Thymus
11 chr1:149922200-149937400 Weak transcription Colonic Mucosa Colon
12 chr1:149922200-149937600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:149922400-149934400 Weak transcription Psoas Muscle Psoas
14 chr1:149922400-149951600 Weak transcription Small Intestine intestine
15 chr1:149927400-149934000 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:149928200-149934400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:149928400-149933800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr1:149928400-149934200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:149928400-149934200 Strong transcription Adipose Nuclei Adipose
20 chr1:149929000-149934200 Strong transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:149929400-149933600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:149929400-149933800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:149929400-149933800 Strong transcription Duodenum Mucosa Duodenum
24 chr1:149929400-149934200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:149929400-149940000 Strong transcription Skeletal Muscle Female skeletal muscle
26 chr1:149929400-149948400 Strong transcription Rectal Mucosa Donor 29 rectum
27 chr1:149929600-149933400 Strong transcription Brain Hippocampus Middle brain
28 chr1:149929600-149940200 Strong transcription HUVEC blood vessel
29 chr1:149929600-149950200 Strong transcription Osteobl bone
30 chr1:149929800-149933200 Strong transcription HSMM muscle
31 chr1:149929800-149933800 Strong transcription Brain Cingulate Gyrus brain
32 chr1:149929800-149933800 Strong transcription HSMMtube muscle
33 chr1:149929800-149936000 Strong transcription NH-A brain
34 chr1:149930000-149933800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:149930000-149935200 Strong transcription Hela-S3 cervix
36 chr1:149930000-149940000 Strong transcription Fetal Muscle Trunk muscle
37 chr1:149930200-149933400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr1:149930200-149933600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:149930200-149933800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:149930200-149933800 Strong transcription HepG2 liver
41 chr1:149930200-149934600 Strong transcription Fetal Lung lung
42 chr1:149930200-149935800 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr1:149930200-149935800 Weak transcription Esophagus oesophagus
44 chr1:149930200-149936000 Weak transcription Aorta Aorta
45 chr1:149930200-149936000 Weak transcription Gastric stomach
46 chr1:149930200-149936000 Strong transcription K562 blood
47 chr1:149930200-149937400 Weak transcription Spleen Spleen
48 chr1:149930400-149934200 Weak transcription Fetal Thymus thymus
49 chr1:149930400-149935800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr1:149930400-149943600 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015