Variant report
| Variant | rs56265028 |
|---|---|
| Chromosome Location | chr1:149881959-149881960 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:149871800-149887400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 2 | chr1:149872000-149887400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 3 | chr1:149872000-149887600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 4 | chr1:149872000-149887600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 5 | chr1:149872000-149887800 | Weak transcription | HSMMtube | muscle |
| 6 | chr1:149872200-149882400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 7 | chr1:149872200-149882800 | Weak transcription | Small Intestine | intestine |
| 8 | chr1:149872200-149884200 | Weak transcription | Fetal Brain Male | brain |
| 9 | chr1:149872200-149885600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 10 | chr1:149872200-149887400 | Weak transcription | Right Atrium | heart |
| 11 | chr1:149872200-149887600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 12 | chr1:149872200-149887600 | Weak transcription | NH-A | brain |
| 13 | chr1:149872200-149887800 | Weak transcription | Placenta | Placenta |
| 14 | chr1:149872200-149888000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 15 | chr1:149872200-149888200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 16 | chr1:149872200-149888400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 17 | chr1:149872200-149888400 | Weak transcription | Esophagus | oesophagus |
| 18 | chr1:149872400-149884600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 19 | chr1:149872400-149885800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 20 | chr1:149872400-149887400 | Weak transcription | Spleen | Spleen |
| 21 | chr1:149872400-149887600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 22 | chr1:149872400-149888200 | Weak transcription | Colon Smooth Muscle | Colon |
| 23 | chr1:149872400-149888400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 24 | chr1:149872400-149888400 | Weak transcription | Right Ventricle | heart |
| 25 | chr1:149872600-149886000 | Weak transcription | Primary T cells from cord blood | blood |
| 26 | chr1:149872600-149886000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 27 | chr1:149872600-149887200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 28 | chr1:149872600-149887200 | Weak transcription | Fetal Kidney | kidney |
| 29 | chr1:149872600-149887400 | Weak transcription | Fetal Lung | lung |
| 30 | chr1:149872600-149888200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 31 | chr1:149873800-149885400 | Strong transcription | Dnd41 | blood |
| 32 | chr1:149874600-149882600 | Strong transcription | Brain Germinal Matrix | brain |
| 33 | chr1:149874800-149885400 | Strong transcription | Brain Anterior Caudate | brain |
| 34 | chr1:149874800-149885600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 35 | chr1:149874800-149885800 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 36 | chr1:149875000-149884400 | Strong transcription | Fetal Brain Female | brain |
| 37 | chr1:149875000-149884600 | Strong transcription | Brain Cingulate Gyrus | brain |
| 38 | chr1:149875000-149885400 | Strong transcription | NHLF | lung |
| 39 | chr1:149875000-149885600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 40 | chr1:149875000-149885600 | Strong transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 41 | chr1:149875000-149885600 | Strong transcription | Fetal Stomach | stomach |
| 42 | chr1:149875000-149886000 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 43 | chr1:149875000-149886200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 44 | chr1:149875200-149885600 | Strong transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 45 | chr1:149875200-149887400 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 46 | chr1:149875400-149885600 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 47 | chr1:149875400-149885600 | Strong transcription | Brain Hippocampus Middle | brain |
| 48 | chr1:149875400-149885800 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 49 | chr1:149875600-149886000 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 50 | chr1:149875800-149884600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
