The 2.0 version of rSNPBase

Variant report

Variant rs11584354
Chromosome Location chr1:150039047-150039048
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150037600-150040400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:150037800-150040800 Active TSS K562 blood
3 chr1:150038000-150040200 Active TSS Brain Angular Gyrus brain
4 chr1:150038000-150040600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr1:150038000-150041200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:150038000-150041200 Active TSS HUES6 Cell Line embryonic stem cell
7 chr1:150038200-150040000 Active TSS HepG2 liver
8 chr1:150038200-150040400 Active TSS Fetal Kidney kidney
9 chr1:150038200-150040600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:150038200-150040600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:150038200-150040600 Active TSS Fetal Brain Female brain
12 chr1:150038200-150040600 Active TSS NHLF lung
13 chr1:150038400-150039200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:150038400-150039400 Flanking Active TSS Primary T cells from cord blood blood
15 chr1:150038400-150039400 Active TSS Brain Germinal Matrix brain
16 chr1:150038400-150040400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
17 chr1:150038400-150040400 Active TSS Cortex derived primary cultured neurospheres brain
18 chr1:150038400-150040400 Active TSS Fetal Heart heart
19 chr1:150038400-150040600 Active TSS ES-I3 Cell Line embryonic stem cell
20 chr1:150038400-150040600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:150038400-150040600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr1:150038400-150040600 Active TSS HUES48 Cell Line embryonic stem cell
23 chr1:150038400-150040600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:150038400-150040600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:150038400-150040600 Active TSS Fetal Lung lung
26 chr1:150038400-150040600 Active TSS NH-A brain
27 chr1:150038400-150040800 Active TSS iPS-15b Cell Line embryonic stem cell
28 chr1:150038400-150040800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:150038400-150040800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:150038400-150040800 Active TSS HSMMtube muscle
31 chr1:150038400-150041000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:150038400-150041000 Active TSS Stomach Smooth Muscle stomach
33 chr1:150038400-150041200 Active TSS iPS-20b Cell Line embryonic stem cell
34 chr1:150038600-150039200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:150038600-150039200 Flanking Active TSS Liver Liver
36 chr1:150038600-150039400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
37 chr1:150038600-150039400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
38 chr1:150038600-150039600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
39 chr1:150038600-150040400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr1:150038600-150040400 Active TSS H9 Cell Line embryonic stem cell
41 chr1:150038600-150040400 Flanking Active TSS Primary B cells from cord blood blood
42 chr1:150038600-150040400 Flanking Active TSS Primary hematopoietic stem cells blood
43 chr1:150038600-150040400 Active TSS Fetal Muscle Trunk muscle
44 chr1:150038600-150040400 Active TSS Hela-S3 cervix
45 chr1:150038600-150040600 Active TSS ES-WA7 Cell Line embryonic stem cell
46 chr1:150038600-150040600 Active TSS H1 Cell Line embryonic stem cell
47 chr1:150038600-150040600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:150038600-150040600 Active TSS Breast Myoepithelial Primary Cells Breast
49 chr1:150038600-150040600 Active TSS Muscle Satellite Cultured Cells --
50 chr1:150038600-150040600 Active TSS Brain Anterior Caudate brain

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Last update: Aug 31, 2015