Variant report

Variant rs55885412
Chromosome Location chr1:149856720-149856721
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149854000-149856800 Weak transcription Esophagus oesophagus
2 chr1:149855000-149857400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
3 chr1:149855200-149857000 Flanking Active TSS Primary T cells from cord blood blood
4 chr1:149855200-149857600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr1:149855400-149857000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:149855600-149856800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
7 chr1:149855600-149856800 Flanking Active TSS Fetal Lung lung
8 chr1:149855600-149857000 Flanking Active TSS Fetal Thymus thymus
9 chr1:149855600-149857400 Flanking Active TSS Primary B cells from cord blood blood
10 chr1:149855600-149857400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:149855600-149857800 Flanking Active TSS Primary monocytes fromperipheralblood blood
12 chr1:149855600-149860400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:149855600-149860600 Active TSS Ovary ovary
14 chr1:149855800-149856800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:149855800-149857000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:149855800-149857000 Flanking Active TSS Brain Anterior Caudate brain
17 chr1:149855800-149857000 Flanking Active TSS Brain Hippocampus Middle brain
18 chr1:149855800-149857000 Flanking Active TSS Osteobl bone
19 chr1:149855800-149857200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
20 chr1:149855800-149857200 Flanking Active TSS Hela-S3 cervix
21 chr1:149855800-149857800 Flanking Active TSS Primary hematopoietic stem cells blood
22 chr1:149855800-149860200 Active TSS NHLF lung
23 chr1:149855800-149860800 Active TSS Right Ventricle heart
24 chr1:149856000-149856800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
25 chr1:149856000-149856800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
26 chr1:149856000-149856800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:149856000-149856800 Enhancers Small Intestine intestine
28 chr1:149856000-149857000 Flanking Active TSS H1 Cell Line embryonic stem cell
29 chr1:149856000-149857000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
30 chr1:149856000-149857000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:149856000-149857000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
32 chr1:149856000-149857000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
33 chr1:149856000-149857000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
34 chr1:149856000-149857000 Flanking Active TSS Muscle Satellite Cultured Cells --
35 chr1:149856000-149857000 Flanking Active TSS Liver Liver
36 chr1:149856000-149857000 Flanking Active TSS Brain Inferior Temporal Lobe brain
37 chr1:149856000-149857000 Flanking Active TSS Fetal Kidney kidney
38 chr1:149856000-149857000 Flanking Active TSS Fetal Muscle Leg muscle
39 chr1:149856000-149857000 Flanking Active TSS Placenta Placenta
40 chr1:149856000-149857000 Flanking Active TSS Fetal Stomach stomach
41 chr1:149856000-149857000 Flanking Active TSS Psoas Muscle Psoas
42 chr1:149856000-149857000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
43 chr1:149856000-149857000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
44 chr1:149856000-149857000 Flanking Active TSS NH-A brain
45 chr1:149856000-149857000 Flanking Active TSS NHDF-Ad bronchial
46 chr1:149856000-149857200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
47 chr1:149856000-149857200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:149856000-149857200 Flanking Active TSS Brain Cingulate Gyrus brain
49 chr1:149856000-149857200 Flanking Active TSS Fetal Brain Male brain
50 chr1:149856000-149857400 Flanking Active TSS Primary T helper cells fromperipheralblood blood

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