The 2.0 version of rSNPBase

Variant report

Variant rs41264630
Chromosome Location chr1:149885800-149885801
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149871800-149887400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr1:149872000-149887400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:149872000-149887600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:149872000-149887600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr1:149872000-149887800 Weak transcription HSMMtube muscle
6 chr1:149872200-149887400 Weak transcription Right Atrium heart
7 chr1:149872200-149887600 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:149872200-149887600 Weak transcription NH-A brain
9 chr1:149872200-149887800 Weak transcription Placenta Placenta
10 chr1:149872200-149888000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:149872200-149888200 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr1:149872200-149888400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:149872200-149888400 Weak transcription Esophagus oesophagus
14 chr1:149872400-149885800 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr1:149872400-149887400 Weak transcription Spleen Spleen
16 chr1:149872400-149887600 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr1:149872400-149888200 Weak transcription Colon Smooth Muscle Colon
18 chr1:149872400-149888400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:149872400-149888400 Weak transcription Right Ventricle heart
20 chr1:149872600-149886000 Weak transcription Primary T cells from cord blood blood
21 chr1:149872600-149886000 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr1:149872600-149887200 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr1:149872600-149887200 Weak transcription Fetal Kidney kidney
24 chr1:149872600-149887400 Weak transcription Fetal Lung lung
25 chr1:149872600-149888200 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:149874800-149885800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:149875000-149886000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:149875000-149886200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:149875200-149887400 Strong transcription Cortex derived primary cultured neurospheres brain
30 chr1:149875400-149885800 Strong transcription Brain Inferior Temporal Lobe brain
31 chr1:149875600-149886000 Strong transcription HUES48 Cell Line embryonic stem cell
32 chr1:149876000-149885800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:149876200-149885800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr1:149876200-149885800 Strong transcription Thymus Thymus
35 chr1:149876200-149886000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr1:149876200-149887600 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr1:149876600-149887600 Weak transcription Stomach Smooth Muscle stomach
38 chr1:149876600-149888400 Weak transcription Placenta Amnion Placenta Amnion
39 chr1:149876800-149885800 Weak transcription Fetal Thymus thymus
40 chr1:149878400-149886000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:149878400-149888800 Weak transcription Gastric stomach
42 chr1:149878800-149885800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr1:149878800-149887800 Weak transcription Fetal Intestine Small intestine
44 chr1:149879400-149888400 Weak transcription Brain Substantia Nigra brain
45 chr1:149879600-149887000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:149879800-149888400 Weak transcription Osteobl bone
47 chr1:149880800-149888600 Weak transcription Ovary ovary
48 chr1:149882200-149887400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr1:149883200-149886000 Strong transcription iPS-18 Cell Line embryonic stem cell
50 chr1:149883600-149887400 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015