The 2.0 version of rSNPBase

Variant report

Variant rs72692896
Chromosome Location chr1:150048871-150048872
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150040000-150050200 Weak transcription Spleen Spleen
2 chr1:150040200-150090800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:150040400-150049800 Weak transcription Ovary ovary
4 chr1:150040400-150049800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:150040400-150050000 Weak transcription Lung lung
6 chr1:150040400-150056400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:150040400-150061600 Weak transcription Primary neutrophils fromperipheralblood blood
8 chr1:150040400-150078800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:150040400-150082800 Weak transcription Small Intestine intestine
10 chr1:150040400-150086800 Weak transcription Esophagus oesophagus
11 chr1:150040400-150121400 Weak transcription Pancreas Pancrea
12 chr1:150040600-150072200 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr1:150040600-150092000 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr1:150040800-150049000 Weak transcription Primary T cells from cord blood blood
15 chr1:150040800-150049800 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr1:150040800-150049800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:150040800-150049800 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:150040800-150054400 Weak transcription Aorta Aorta
19 chr1:150041000-150049200 Weak transcription Primary hematopoietic stem cells blood
20 chr1:150041000-150049800 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr1:150041000-150049800 Weak transcription Thymus Thymus
22 chr1:150041000-150049800 Weak transcription HSMMtube muscle
23 chr1:150041000-150053600 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr1:150041000-150064000 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr1:150041000-150114400 Weak transcription Right Ventricle heart
26 chr1:150041200-150049200 Weak transcription HepG2 liver
27 chr1:150041200-150049800 Weak transcription Rectal Smooth Muscle rectum
28 chr1:150041200-150054800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:150041400-150049200 Weak transcription Brain Cingulate Gyrus brain
30 chr1:150041400-150049200 Weak transcription Brain Substantia Nigra brain
31 chr1:150041400-150049200 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr1:150041400-150049200 Weak transcription NHLF lung
33 chr1:150041400-150050000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr1:150041400-150053600 Weak transcription Fetal Kidney kidney
35 chr1:150041400-150055800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:150041400-150056000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:150041400-150066000 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr1:150041400-150067800 Weak transcription H9 Cell Line embryonic stem cell
39 chr1:150041400-150069200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:150041800-150058200 Strong transcription Osteobl bone
41 chr1:150042200-150049200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr1:150042200-150050200 Weak transcription Left Ventricle heart
43 chr1:150042200-150051400 Weak transcription Fetal Heart heart
44 chr1:150042200-150073400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr1:150042200-150086600 Weak transcription Gastric stomach
46 chr1:150042400-150049200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr1:150042400-150049200 Weak transcription A549 lung
48 chr1:150042400-150049600 Weak transcription Fetal Brain Male brain
49 chr1:150042400-150063200 Weak transcription NHEK skin
50 chr1:150042400-150067600 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015