The 2.0 version of rSNPBase

Variant report

Variant rs11589922
Chromosome Location chr1:150133323-150133324
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150123200-150135400 Weak transcription A549 lung
2 chr1:150123400-150134400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:150123400-150134400 Weak transcription NHEK skin
4 chr1:150123800-150134200 Weak transcription HMEC breast
5 chr1:150123800-150134600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:150124400-150133400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:150125200-150133600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:150125400-150133600 Genic enhancers NH-A brain
9 chr1:150126800-150133400 Weak transcription Right Atrium heart
10 chr1:150128000-150133400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:150128400-150133600 Weak transcription Fetal Brain Male brain
12 chr1:150129800-150133400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:150129800-150134600 Weak transcription Brain Angular Gyrus brain
14 chr1:150130000-150133400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:150130000-150133800 Weak transcription Brain Substantia Nigra brain
16 chr1:150130200-150133600 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr1:150130200-150134600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr1:150130200-150134600 Weak transcription Psoas Muscle Psoas
19 chr1:150130400-150133400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:150130400-150133800 Genic enhancers Fetal Lung lung
21 chr1:150130800-150133400 Genic enhancers Fetal Muscle Trunk muscle
22 chr1:150130800-150133600 Genic enhancers Fetal Muscle Leg muscle
23 chr1:150130800-150133800 Genic enhancers Fetal Stomach stomach
24 chr1:150131000-150133400 Genic enhancers NHLF lung
25 chr1:150131200-150134400 Weak transcription HepG2 liver
26 chr1:150131400-150134600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
27 chr1:150131600-150133800 Genic enhancers Fetal Adrenal Gland Adrenal Gland
28 chr1:150131600-150135000 Enhancers Ovary ovary
29 chr1:150131800-150133600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:150131800-150133800 Flanking Active TSS Primary hematopoietic stem cells blood
31 chr1:150131800-150135400 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr1:150131800-150135600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
33 chr1:150131800-150135800 Weak transcription Esophagus oesophagus
34 chr1:150131800-150136000 Flanking Active TSS Primary B cells from cord blood blood
35 chr1:150131800-150138600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
36 chr1:150132000-150133600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:150132000-150134000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:150132000-150134000 Weak transcription Lung lung
39 chr1:150132000-150134200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr1:150132000-150134200 Weak transcription Brain Inferior Temporal Lobe brain
41 chr1:150132000-150134800 Enhancers Primary T helper 17 cells PMA-I stimulated --
42 chr1:150132000-150136000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:150132200-150133400 Weak transcription Adipose Nuclei Adipose
44 chr1:150132200-150133400 Weak transcription Brain Anterior Caudate brain
45 chr1:150132200-150133800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:150132200-150134000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
47 chr1:150132200-150134000 Weak transcription Right Ventricle heart
48 chr1:150132200-150134000 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr1:150132200-150134000 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr1:150132200-150134400 Weak transcription Liver Liver

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Last update: Aug 31, 2015