The 2.0 version of rSNPBase

Variant report

Variant rs56188926
Chromosome Location chr1:150073256-150073257
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150040200-150090800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:150040400-150078800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:150040400-150082800 Weak transcription Small Intestine intestine
4 chr1:150040400-150086800 Weak transcription Esophagus oesophagus
5 chr1:150040400-150121400 Weak transcription Pancreas Pancrea
6 chr1:150040600-150092000 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr1:150041000-150114400 Weak transcription Right Ventricle heart
8 chr1:150042200-150073400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:150042200-150086600 Weak transcription Gastric stomach
10 chr1:150042600-150090800 Weak transcription Stomach Mucosa stomach
11 chr1:150050600-150084800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:150052000-150116800 Weak transcription Spleen Spleen
13 chr1:150055000-150086200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:150055000-150100600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:150055000-150120800 Weak transcription Aorta Aorta
16 chr1:150055200-150078400 Weak transcription Thymus Thymus
17 chr1:150055200-150096000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr1:150055200-150104800 Weak transcription Brain Cingulate Gyrus brain
19 chr1:150055600-150076400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr1:150056200-150074200 Weak transcription Lung lung
21 chr1:150056200-150081800 Weak transcription Brain Substantia Nigra brain
22 chr1:150056600-150073400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:150056600-150086400 Weak transcription H1 Cell Line embryonic stem cell
24 chr1:150056800-150073400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:150057000-150084800 Weak transcription A549 lung
26 chr1:150060000-150096000 Weak transcription Placenta Amnion Placenta Amnion
27 chr1:150061000-150116800 Weak transcription Ovary ovary
28 chr1:150061800-150084800 Weak transcription Left Ventricle heart
29 chr1:150063600-150073400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:150063800-150083400 Weak transcription Stomach Smooth Muscle stomach
31 chr1:150064000-150073400 Strong transcription Fetal Thymus thymus
32 chr1:150064800-150077600 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr1:150065200-150077800 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr1:150065400-150073400 Strong transcription Fetal Muscle Trunk muscle
35 chr1:150065400-150074800 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr1:150066200-150076600 Weak transcription Primary T cells fromperipheralblood blood
37 chr1:150066200-150081400 Weak transcription Primary hematopoietic stem cells blood
38 chr1:150066200-150086600 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr1:150066200-150087800 Weak transcription HSMMtube muscle
40 chr1:150066200-150096600 Weak transcription Rectal Smooth Muscle rectum
41 chr1:150067000-150113200 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:150067200-150075400 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr1:150067200-150082200 Weak transcription NHDF-Ad bronchial
44 chr1:150067200-150083200 Weak transcription Brain Anterior Caudate brain
45 chr1:150067200-150086400 Weak transcription HMEC breast
46 chr1:150067200-150101200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr1:150067400-150074600 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr1:150067400-150076600 Weak transcription Fetal Heart heart
49 chr1:150067400-150081200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:150067400-150086800 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015