The 2.0 version of rSNPBase

Variant report

Variant rs6666959
Chromosome Location chr1:150088955-150088956
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150040200-150090800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:150040400-150121400 Weak transcription Pancreas Pancrea
3 chr1:150040600-150092000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:150041000-150114400 Weak transcription Right Ventricle heart
5 chr1:150042600-150090800 Weak transcription Stomach Mucosa stomach
6 chr1:150052000-150116800 Weak transcription Spleen Spleen
7 chr1:150055000-150100600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:150055000-150120800 Weak transcription Aorta Aorta
9 chr1:150055200-150096000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:150055200-150104800 Weak transcription Brain Cingulate Gyrus brain
11 chr1:150060000-150096000 Weak transcription Placenta Amnion Placenta Amnion
12 chr1:150061000-150116800 Weak transcription Ovary ovary
13 chr1:150066200-150096600 Weak transcription Rectal Smooth Muscle rectum
14 chr1:150067000-150113200 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr1:150067200-150101200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:150067400-150121200 Weak transcription Colonic Mucosa Colon
17 chr1:150069000-150093600 Weak transcription NHEK skin
18 chr1:150069000-150113800 Weak transcription Fetal Kidney kidney
19 chr1:150069000-150121000 Weak transcription NHLF lung
20 chr1:150071000-150121000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr1:150071200-150120600 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr1:150071400-150092200 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr1:150071400-150093400 Weak transcription Hela-S3 cervix
24 chr1:150072400-150121000 Weak transcription Brain Angular Gyrus brain
25 chr1:150073400-150094400 Weak transcription Liver Liver
26 chr1:150077200-150113000 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr1:150077400-150112800 Weak transcription Fetal Heart heart
28 chr1:150079200-150121000 Weak transcription Thymus Thymus
29 chr1:150083200-150093600 Weak transcription HUVEC blood vessel
30 chr1:150083200-150116400 Weak transcription Primary hematopoietic stem cells blood
31 chr1:150083600-150093400 Weak transcription NHDF-Ad bronchial
32 chr1:150083600-150120800 Weak transcription Brain Hippocampus Middle brain
33 chr1:150084000-150110600 Weak transcription Stomach Smooth Muscle stomach
34 chr1:150085000-150095800 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr1:150085000-150100800 Weak transcription Lung lung
36 chr1:150085200-150090000 Weak transcription Primary T cells fromperipheralblood blood
37 chr1:150085400-150089800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:150085400-150090800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr1:150085400-150093400 Weak transcription Muscle Satellite Cultured Cells --
40 chr1:150085400-150093600 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr1:150085400-150116400 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:150085400-150119000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:150085400-150120800 Weak transcription NH-A brain
44 chr1:150085400-150121200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr1:150085400-150121200 Weak transcription Psoas Muscle Psoas
46 chr1:150085600-150099200 Weak transcription HSMM muscle
47 chr1:150085600-150121200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:150085800-150090200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr1:150085800-150121000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr1:150086000-150090800 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015