The 2.0 version of rSNPBase

Variant report

Variant rs72692834
Chromosome Location chr1:149985077-149985078
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149982800-149994400 Weak transcription Gastric stomach
2 chr1:149983000-149985600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:149983000-149992800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:149983200-149985200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr1:149983200-149985200 Enhancers Rectal Mucosa Donor 31 rectum
6 chr1:149983200-149985200 Enhancers Stomach Mucosa stomach
7 chr1:149983200-149985400 Enhancers HSMM muscle
8 chr1:149983200-149985600 Enhancers Fetal Intestine Small intestine
9 chr1:149983200-149987400 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:149983200-149987600 Weak transcription Right Atrium heart
11 chr1:149983400-149985200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:149983400-149985400 Enhancers Brain Angular Gyrus brain
13 chr1:149983400-149985400 Enhancers Brain Cingulate Gyrus brain
14 chr1:149983400-149985400 Enhancers Brain Inferior Temporal Lobe brain
15 chr1:149983400-149985400 Enhancers HepG2 liver
16 chr1:149983400-149987600 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr1:149983400-149988800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:149983400-149988800 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr1:149983400-149989000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:149983400-149989400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:149983400-149989400 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr1:149983600-149987600 Weak transcription A549 lung
23 chr1:149983800-149985200 Enhancers HSMMtube muscle
24 chr1:149984600-149985200 Enhancers Duodenum Mucosa Duodenum
25 chr1:149984600-149985400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:149984600-149985400 Enhancers Fetal Intestine Large intestine
27 chr1:149984600-149987400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:149984800-149985200 Enhancers Adipose Nuclei Adipose
29 chr1:149984800-149985200 Active TSS Brain Anterior Caudate brain
30 chr1:149984800-149985200 Flanking Active TSS Brain Hippocampus Middle brain
31 chr1:149984800-149985200 Flanking Active TSS Brain Substantia Nigra brain
32 chr1:149984800-149985200 Enhancers GM12878-XiMat blood
33 chr1:149984800-149985400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:149984800-149985400 Enhancers Rectal Mucosa Donor 29 rectum
35 chr1:149984800-149985400 Flanking Active TSS Osteobl bone
36 chr1:149985000-149985200 Weak transcription Liver Liver
37 chr1:149985000-149985200 Enhancers NH-A brain
38 chr1:149985000-149985600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:149985000-149986600 Weak transcription K562 blood
40 chr1:149985000-149987600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:149985000-149989400 Weak transcription Hela-S3 cervix
42 chr1:149985000-149989600 Weak transcription Colonic Mucosa Colon
43 chr1:149985000-149993200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015