Variant report
| Variant | rs16836630 |
|---|---|
| Chromosome Location | chr1:149898951-149898952 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:149897000-149899000 | Weak transcription | Aorta | Aorta |
| 2 | chr1:149897200-149899000 | Transcr. at gene 5' and 3' | Stomach Smooth Muscle | stomach |
| 3 | chr1:149897400-149899000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 4 | chr1:149897600-149899000 | Genic enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 5 | chr1:149897600-149899000 | Genic enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 6 | chr1:149897600-149899000 | Genic enhancers | Placenta | Placenta |
| 7 | chr1:149897600-149899000 | Transcr. at gene 5' and 3' | Hela-S3 | cervix |
| 8 | chr1:149897600-149899000 | Transcr. at gene 5' and 3' | HSMM | muscle |
| 9 | chr1:149897600-149899200 | Transcr. at gene 5' and 3' | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr1:149897600-149899600 | Transcr. at gene 5' and 3' | Dnd41 | blood |
| 11 | chr1:149897800-149899000 | Genic enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 12 | chr1:149897800-149899000 | Genic enhancers | Primary B cells from peripheral blood | blood |
| 13 | chr1:149898000-149899000 | Transcr. at gene 5' and 3' | iPS-20b Cell Line | embryonic stem cell |
| 14 | chr1:149898000-149899000 | Transcr. at gene 5' and 3' | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 15 | chr1:149898000-149899000 | Genic enhancers | Primary monocytes fromperipheralblood | blood |
| 16 | chr1:149898000-149899200 | Transcr. at gene 5' and 3' | HUES6 Cell Line | embryonic stem cell |
| 17 | chr1:149898000-149899200 | Transcr. at gene 5' and 3' | Rectal Smooth Muscle | rectum |
| 18 | chr1:149898000-149899200 | Transcr. at gene 5' and 3' | A549 | lung |
| 19 | chr1:149898000-149899200 | Flanking Active TSS | HUVEC | blood vessel |
| 20 | chr1:149898000-149899200 | Transcr. at gene 5' and 3' | NHEK | skin |
| 21 | chr1:149898200-149899000 | Transcr. at gene 5' and 3' | HUES64 Cell Line | embryonic stem cell |
| 22 | chr1:149898200-149899000 | Transcr. at gene 5' and 3' | Muscle Satellite Cultured Cells | -- |
| 23 | chr1:149898200-149899000 | Transcr. at gene 5' and 3' | Fetal Lung | lung |
| 24 | chr1:149898200-149899000 | Enhancers | Small Intestine | intestine |
| 25 | chr1:149898200-149899000 | Transcr. at gene 5' and 3' | NH-A | brain |
| 26 | chr1:149898200-149899600 | Transcr. at gene 5' and 3' | Skeletal Muscle Male | skeletal muscle |
| 27 | chr1:149898400-149899000 | Transcr. at gene 5' and 3' | ES-I3 Cell Line | embryonic stem cell |
| 28 | chr1:149898400-149899000 | Flanking Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 29 | chr1:149898400-149899000 | Transcr. at gene 5' and 3' | Brain Cingulate Gyrus | brain |
| 30 | chr1:149898400-149899000 | Enhancers | Placenta Amnion | Placenta Amnion |
| 31 | chr1:149898400-149899000 | Transcr. at gene 5' and 3' | Rectal Mucosa Donor 29 | rectum |
| 32 | chr1:149898400-149899000 | Flanking Active TSS | GM12878-XiMat | blood |
| 33 | chr1:149898400-149899800 | Transcr. at gene 5' and 3' | Primary T helper naive cells fromperipheralblood | blood |
| 34 | chr1:149898600-149899000 | Flanking Active TSS | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 35 | chr1:149898600-149899000 | Flanking Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 36 | chr1:149898600-149899000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 37 | chr1:149898600-149899000 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 38 | chr1:149898600-149899000 | Flanking Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 39 | chr1:149898600-149899000 | Flanking Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 40 | chr1:149898600-149899000 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 41 | chr1:149898600-149899000 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 42 | chr1:149898600-149899000 | Flanking Active TSS | Fetal Kidney | kidney |
| 43 | chr1:149898600-149899000 | Flanking Active TSS | HepG2 | liver |
| 44 | chr1:149898600-149899000 | Flanking Active TSS | NHDF-Ad | bronchial |
| 45 | chr1:149898600-149899200 | Flanking Active TSS | Cortex derived primary cultured neurospheres | brain |
| 46 | chr1:149898600-149899200 | Flanking Active TSS | Liver | Liver |
| 47 | chr1:149898600-149899200 | Flanking Active TSS | Brain Germinal Matrix | brain |
| 48 | chr1:149898600-149899200 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
| 49 | chr1:149898600-149899200 | Flanking Active TSS | Duodenum Smooth Muscle | Duodenum |
| 50 | chr1:149898600-149899200 | Flanking Active TSS | Thymus | Thymus |
