Variant report
| Variant | rs2198194 |
|---|---|
| Chromosome Location | chr1:149948993-149948994 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:149922400-149951600 | Weak transcription | Small Intestine | intestine |
| 2 | chr1:149929600-149950200 | Strong transcription | Osteobl | bone |
| 3 | chr1:149930800-149959000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 4 | chr1:149931800-149949600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr1:149931800-149949800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 6 | chr1:149932000-149949200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 7 | chr1:149932000-149949600 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 8 | chr1:149933200-149949600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 9 | chr1:149934200-149958000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 10 | chr1:149934400-149949600 | Strong transcription | Fetal Muscle Leg | muscle |
| 11 | chr1:149934600-149949600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 12 | chr1:149934600-149949600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 13 | chr1:149935600-149950400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 14 | chr1:149935800-149949400 | Strong transcription | Left Ventricle | heart |
| 15 | chr1:149936400-149949400 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 16 | chr1:149936400-149949600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 17 | chr1:149937200-149949600 | Strong transcription | Stomach Smooth Muscle | stomach |
| 18 | chr1:149938000-149950600 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 19 | chr1:149938000-149951000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 20 | chr1:149938000-149953000 | Weak transcription | Thymus | Thymus |
| 21 | chr1:149938200-149950600 | Weak transcription | Stomach Mucosa | stomach |
| 22 | chr1:149939600-149951600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 23 | chr1:149939600-149951600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 24 | chr1:149939600-149953400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 25 | chr1:149939600-149958000 | Weak transcription | Aorta | Aorta |
| 26 | chr1:149939800-149949600 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 27 | chr1:149940200-149949600 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 28 | chr1:149940800-149949400 | Strong transcription | Adipose Nuclei | Adipose |
| 29 | chr1:149940800-149949600 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 30 | chr1:149941000-149949600 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 31 | chr1:149941200-149949400 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 32 | chr1:149941200-149949800 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 33 | chr1:149941200-149957400 | Weak transcription | Spleen | Spleen |
| 34 | chr1:149943400-149951200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 35 | chr1:149943600-149949800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 36 | chr1:149944200-149951600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 37 | chr1:149944400-149949600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 38 | chr1:149944800-149957800 | Weak transcription | NHDF-Ad | bronchial |
| 39 | chr1:149945000-149950600 | Weak transcription | Primary T cells from cord blood | blood |
| 40 | chr1:149945200-149949400 | Strong transcription | Fetal Stomach | stomach |
| 41 | chr1:149945400-149950600 | Weak transcription | Fetal Heart | heart |
| 42 | chr1:149945600-149949000 | Weak transcription | Fetal Brain Female | brain |
| 43 | chr1:149945600-149950200 | Weak transcription | Psoas Muscle | Psoas |
| 44 | chr1:149946400-149957200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 45 | chr1:149946400-149959000 | Weak transcription | Gastric | stomach |
| 46 | chr1:149946600-149949400 | Strong transcription | Placenta | Placenta |
| 47 | chr1:149947000-149949600 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 48 | chr1:149947000-149949800 | Strong transcription | Hela-S3 | cervix |
| 49 | chr1:149947000-149952200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 50 | chr1:149947200-149949600 | Strong transcription | Fetal Intestine Small | intestine |
