The 2.0 version of rSNPBase

Variant report

Variant rs3118119
Chromosome Location chr1:150159616-150159617
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150145800-150160000 Weak transcription Right Atrium heart
2 chr1:150154800-150159800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:150156000-150159800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr1:150156600-150159800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr1:150157200-150159800 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr1:150158200-150160000 Enhancers HSMM muscle
7 chr1:150158200-150160000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
8 chr1:150158400-150160000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
9 chr1:150158600-150160000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:150158800-150160000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:150158800-150160200 Active TSS Brain Angular Gyrus brain
12 chr1:150158800-150160200 Enhancers Brain Cingulate Gyrus brain
13 chr1:150158800-150160200 Enhancers NHDF-Ad bronchial
14 chr1:150158800-150160400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:150158800-150160600 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr1:150159000-150159800 Active TSS Stomach Smooth Muscle stomach
17 chr1:150159000-150160000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr1:150159000-150160000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr1:150159000-150160200 Enhancers Dnd41 blood
20 chr1:150159200-150160000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:150159200-150160000 Enhancers Primary T helper cells PMA-I stimulated --
22 chr1:150159200-150160000 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr1:150159200-150160000 Enhancers Primary T helper cells fromperipheralblood blood
24 chr1:150159200-150160000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:150159200-150160000 Active TSS Aorta Aorta
26 chr1:150159200-150160000 Enhancers Brain Substantia Nigra brain
27 chr1:150159200-150160000 Enhancers Fetal Intestine Small intestine
28 chr1:150159200-150160000 Enhancers Rectal Mucosa Donor 29 rectum
29 chr1:150159200-150160200 Enhancers HMEC breast
30 chr1:150159200-150160400 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr1:150159200-150160400 Enhancers GM12878-XiMat blood
32 chr1:150159200-150160400 Enhancers HSMMtube muscle
33 chr1:150159400-150159800 Enhancers Primary T cells fromperipheralblood blood
34 chr1:150159400-150160000 Enhancers Brain Hippocampus Middle brain
35 chr1:150159400-150160000 Enhancers Placenta Placenta
36 chr1:150159400-150160200 Enhancers Primary B cells from peripheral blood blood
37 chr1:150159400-150160200 Enhancers Skeletal Muscle Female skeletal muscle
38 chr1:150159400-150160200 Enhancers K562 blood
39 chr1:150159400-150160400 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr1:150159400-150160400 Enhancers Liver Liver
41 chr1:150159400-150160600 Enhancers Primary monocytes fromperipheralblood blood
42 chr1:150159600-150159800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:150159600-150159800 Enhancers Muscle Satellite Cultured Cells --
44 chr1:150159600-150159800 Enhancers Brain Inferior Temporal Lobe brain
45 chr1:150159600-150159800 Enhancers Skeletal Muscle Male skeletal muscle
46 chr1:150159600-150159800 Enhancers Hela-S3 cervix
47 chr1:150159600-150159800 Enhancers Osteobl bone
48 chr1:150159600-150160000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
49 chr1:150159600-150160000 Enhancers Colon Smooth Muscle Colon
50 chr1:150159600-150160200 Enhancers Primary B cells from cord blood blood

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Last update: Aug 31, 2015