The 2.0 version of rSNPBase

Variant report

Variant rs56212907
Chromosome Location chr1:150058805-150058806
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150040200-150090800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:150040400-150061600 Weak transcription Primary neutrophils fromperipheralblood blood
3 chr1:150040400-150078800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:150040400-150082800 Weak transcription Small Intestine intestine
5 chr1:150040400-150086800 Weak transcription Esophagus oesophagus
6 chr1:150040400-150121400 Weak transcription Pancreas Pancrea
7 chr1:150040600-150072200 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:150040600-150092000 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr1:150041000-150064000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr1:150041000-150114400 Weak transcription Right Ventricle heart
11 chr1:150041400-150066000 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr1:150041400-150067800 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:150041400-150069200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:150042200-150073400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:150042200-150086600 Weak transcription Gastric stomach
16 chr1:150042400-150063200 Weak transcription NHEK skin
17 chr1:150042400-150067600 Weak transcription Psoas Muscle Psoas
18 chr1:150042600-150090800 Weak transcription Stomach Mucosa stomach
19 chr1:150043200-150060200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr1:150043400-150060400 Strong transcription HUES48 Cell Line embryonic stem cell
21 chr1:150045800-150060000 Strong transcription Primary monocytes fromperipheralblood blood
22 chr1:150046600-150060000 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr1:150047400-150060400 Strong transcription Rectal Mucosa Donor 31 rectum
24 chr1:150048400-150068400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr1:150048600-150060400 Strong transcription Adipose Nuclei Adipose
26 chr1:150048600-150061000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:150048800-150064000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr1:150050200-150065600 Weak transcription Fetal Brain Male brain
29 chr1:150050400-150064000 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr1:150050600-150067200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:150050600-150084800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr1:150051200-150065400 Weak transcription Rectal Smooth Muscle rectum
33 chr1:150051600-150065400 Weak transcription HSMMtube muscle
34 chr1:150051800-150064000 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr1:150052000-150060200 Weak transcription Ovary ovary
36 chr1:150052000-150060400 Strong transcription NHDF-Ad bronchial
37 chr1:150052000-150071400 Weak transcription Fetal Intestine Small intestine
38 chr1:150052000-150116800 Weak transcription Spleen Spleen
39 chr1:150052800-150061200 Strong transcription HUES64 Cell Line embryonic stem cell
40 chr1:150053000-150060400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:150053400-150059200 Strong transcription Primary T helper cells PMA-I stimulated --
42 chr1:150053400-150060000 Strong transcription Primary T cells from cord blood blood
43 chr1:150053400-150060400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:150053600-150059000 Strong transcription Sigmoid Colon Sigmoid Colon
45 chr1:150053600-150061000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:150053800-150059800 Strong transcription Brain Hippocampus Middle brain
47 chr1:150053800-150060600 Strong transcription Primary B cells from cord blood blood
48 chr1:150055000-150060600 Weak transcription Fetal Stomach stomach
49 chr1:150055000-150063800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr1:150055000-150086200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015