The 2.0 version of rSNPBase

Variant report

Variant rs72708162
Chromosome Location chr1:149882811-149882812
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149871800-149887400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr1:149872000-149887400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:149872000-149887600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:149872000-149887600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr1:149872000-149887800 Weak transcription HSMMtube muscle
6 chr1:149872200-149884200 Weak transcription Fetal Brain Male brain
7 chr1:149872200-149885600 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr1:149872200-149887400 Weak transcription Right Atrium heart
9 chr1:149872200-149887600 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:149872200-149887600 Weak transcription NH-A brain
11 chr1:149872200-149887800 Weak transcription Placenta Placenta
12 chr1:149872200-149888000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:149872200-149888200 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:149872200-149888400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:149872200-149888400 Weak transcription Esophagus oesophagus
16 chr1:149872400-149884600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:149872400-149885800 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr1:149872400-149887400 Weak transcription Spleen Spleen
19 chr1:149872400-149887600 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr1:149872400-149888200 Weak transcription Colon Smooth Muscle Colon
21 chr1:149872400-149888400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:149872400-149888400 Weak transcription Right Ventricle heart
23 chr1:149872600-149886000 Weak transcription Primary T cells from cord blood blood
24 chr1:149872600-149886000 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr1:149872600-149887200 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:149872600-149887200 Weak transcription Fetal Kidney kidney
27 chr1:149872600-149887400 Weak transcription Fetal Lung lung
28 chr1:149872600-149888200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr1:149873800-149885400 Strong transcription Dnd41 blood
30 chr1:149874800-149885400 Strong transcription Brain Anterior Caudate brain
31 chr1:149874800-149885600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:149874800-149885800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr1:149875000-149884400 Strong transcription Fetal Brain Female brain
34 chr1:149875000-149884600 Strong transcription Brain Cingulate Gyrus brain
35 chr1:149875000-149885400 Strong transcription NHLF lung
36 chr1:149875000-149885600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:149875000-149885600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr1:149875000-149885600 Strong transcription Fetal Stomach stomach
39 chr1:149875000-149886000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:149875000-149886200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:149875200-149885600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:149875200-149887400 Strong transcription Cortex derived primary cultured neurospheres brain
43 chr1:149875400-149885600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:149875400-149885600 Strong transcription Brain Hippocampus Middle brain
45 chr1:149875400-149885800 Strong transcription Brain Inferior Temporal Lobe brain
46 chr1:149875600-149886000 Strong transcription HUES48 Cell Line embryonic stem cell
47 chr1:149875800-149884600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
48 chr1:149876000-149883600 Strong transcription Aorta Aorta
49 chr1:149876000-149885800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:149876200-149883400 Strong transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015