The 2.0 version of rSNPBase

Variant report

Variant rs11579341
Chromosome Location chr1:150346087-150346088
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150338400-150405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:150338800-150346800 Weak transcription Lung lung
3 chr1:150339400-150346400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:150339400-150346400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr1:150339400-150346600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr1:150339400-150348800 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr1:150339400-150372800 Weak transcription Fetal Muscle Leg muscle
8 chr1:150339400-150390600 Weak transcription Fetal Muscle Trunk muscle
9 chr1:150339600-150346400 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:150339600-150346400 Weak transcription H1 Cell Line embryonic stem cell
11 chr1:150339600-150346400 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr1:150339600-150346400 Weak transcription Right Atrium heart
13 chr1:150339600-150346600 Weak transcription Small Intestine intestine
14 chr1:150339600-150349400 Weak transcription Fetal Stomach stomach
15 chr1:150339600-150356400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr1:150339600-150359800 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr1:150339600-150372800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:150339800-150346200 Weak transcription Brain Hippocampus Middle brain
19 chr1:150339800-150346200 Weak transcription Colon Smooth Muscle Colon
20 chr1:150339800-150346400 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr1:150339800-150346400 Weak transcription Brain Cingulate Gyrus brain
22 chr1:150339800-150346400 Weak transcription Brain Substantia Nigra brain
23 chr1:150339800-150346400 Weak transcription Right Ventricle heart
24 chr1:150339800-150346400 Weak transcription Stomach Smooth Muscle stomach
25 chr1:150339800-150346600 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:150339800-150347000 Weak transcription Fetal Lung lung
27 chr1:150339800-150347400 Weak transcription Rectal Smooth Muscle rectum
28 chr1:150339800-150368600 Weak transcription Primary hematopoietic stem cells blood
29 chr1:150339800-150390000 Weak transcription Thymus Thymus
30 chr1:150340000-150346200 Weak transcription Adipose Nuclei Adipose
31 chr1:150340000-150346600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr1:150340000-150346600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr1:150340000-150346800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:150340000-150346800 Weak transcription Brain Germinal Matrix brain
35 chr1:150340000-150346800 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:150340000-150362000 Weak transcription Primary B cells from cord blood blood
37 chr1:150340000-150416800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:150340200-150347200 Enhancers Primary T cells fromperipheralblood blood
39 chr1:150340200-150347600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:150340200-150348600 Enhancers Primary T helper cells fromperipheralblood blood
41 chr1:150340600-150346200 Weak transcription Brain Inferior Temporal Lobe brain
42 chr1:150340600-150346400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:150340600-150346400 Weak transcription Fetal Brain Male brain
44 chr1:150340600-150347600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:150340600-150366800 Weak transcription Fetal Brain Female brain
46 chr1:150341400-150348400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr1:150342600-150348600 Enhancers Primary T helper naive cells fromperipheralblood blood
48 chr1:150342600-150348600 Enhancers Primary T helper 17 cells PMA-I stimulated --
49 chr1:150342600-150349600 Enhancers Primary T helper naive cells from peripheral blood blood
50 chr1:150342800-150361600 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015