The 2.0 version of rSNPBase

Variant report

Variant rs1343965
Chromosome Location chr1:150468842-150468843
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150460600-150469000 Weak transcription Pancreas Pancrea
2 chr1:150460600-150480200 Weak transcription Right Atrium heart
3 chr1:150460600-150480200 Weak transcription Stomach Mucosa stomach
4 chr1:150460800-150470000 Weak transcription HMEC breast
5 chr1:150460800-150470600 Weak transcription Fetal Brain Male brain
6 chr1:150460800-150476800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:150460800-150478000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:150460800-150480000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr1:150461000-150486800 Weak transcription Fetal Heart heart
10 chr1:150461200-150473600 Strong transcription HUES6 Cell Line embryonic stem cell
11 chr1:150461200-150478200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:150461200-150478600 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr1:150461400-150470800 Strong transcription Fetal Adrenal Gland Adrenal Gland
14 chr1:150461400-150475800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr1:150461400-150480000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:150461400-150480400 Strong transcription Primary T helper cells fromperipheralblood blood
17 chr1:150461400-150480400 Strong transcription Fetal Muscle Trunk muscle
18 chr1:150461400-150480600 Strong transcription Fetal Intestine Large intestine
19 chr1:150461600-150473000 Strong transcription Skeletal Muscle Female skeletal muscle
20 chr1:150461600-150473800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:150461800-150473800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:150462000-150480000 Strong transcription Fetal Stomach stomach
23 chr1:150462000-150480600 Strong transcription Fetal Intestine Small intestine
24 chr1:150462000-150485800 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr1:150462400-150473800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr1:150463200-150479800 Strong transcription Primary T helper naive cells fromperipheralblood blood
27 chr1:150463400-150477600 Weak transcription Fetal Kidney kidney
28 chr1:150463600-150471400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:150464000-150475600 Weak transcription Muscle Satellite Cultured Cells --
30 chr1:150464000-150477000 Weak transcription HUVEC blood vessel
31 chr1:150464200-150470000 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr1:150464200-150476800 Weak transcription Psoas Muscle Psoas
33 chr1:150464400-150471400 Weak transcription Hela-S3 cervix
34 chr1:150464400-150475400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:150464800-150480200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:150465600-150470000 Weak transcription Right Ventricle heart
37 chr1:150465800-150469000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr1:150466000-150469000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr1:150466000-150469000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:150466000-150469000 Weak transcription Aorta Aorta
41 chr1:150466000-150469000 Weak transcription A549 lung
42 chr1:150466000-150477800 Weak transcription Small Intestine intestine
43 chr1:150466400-150469000 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr1:150466400-150469000 Weak transcription Brain Cingulate Gyrus brain
45 chr1:150466400-150469800 Weak transcription Brain Hippocampus Middle brain
46 chr1:150466400-150470000 Weak transcription NHLF lung
47 chr1:150466400-150476600 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr1:150466600-150469000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr1:150466600-150470600 Weak transcription NH-A brain
50 chr1:150466800-150469000 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015