The 2.0 version of rSNPBase

Variant report

Variant rs12136802
Chromosome Location chr1:150450204-150450205
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150444800-150459000 Weak transcription GM12878-XiMat blood
2 chr1:150445000-150452800 Enhancers HepG2 liver
3 chr1:150445000-150459400 Weak transcription Fetal Brain Male brain
4 chr1:150445200-150450600 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr1:150445400-150450400 Weak transcription Fetal Kidney kidney
6 chr1:150445400-150450400 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr1:150445400-150459400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:150445600-150450800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:150445600-150450800 Enhancers Skeletal Muscle Male skeletal muscle
10 chr1:150445800-150450400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:150445800-150451600 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr1:150445800-150459400 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr1:150445800-150459400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:150445800-150459600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:150446000-150451000 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr1:150446000-150453600 Weak transcription Brain Germinal Matrix brain
17 chr1:150446000-150457200 Weak transcription Hela-S3 cervix
18 chr1:150446200-150452000 Weak transcription Fetal Muscle Trunk muscle
19 chr1:150446200-150459000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:150446400-150456000 Weak transcription Brain Angular Gyrus brain
21 chr1:150446400-150457200 Weak transcription Esophagus oesophagus
22 chr1:150446400-150459000 Weak transcription Primary B cells from peripheral blood blood
23 chr1:150446400-150459200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr1:150446400-150459400 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:150446400-150459400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:150446400-150459400 Weak transcription Rectal Smooth Muscle rectum
27 chr1:150446600-150450600 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr1:150446600-150451200 Weak transcription Primary T cells from cord blood blood
29 chr1:150446600-150459000 Weak transcription Primary hematopoietic stem cells blood
30 chr1:150446600-150459200 Weak transcription Primary T cells fromperipheralblood blood
31 chr1:150446800-150450400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:150446800-150450600 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr1:150446800-150459000 Weak transcription Primary B cells from cord blood blood
34 chr1:150447000-150450600 Weak transcription Fetal Brain Female brain
35 chr1:150447200-150457200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:150447200-150459200 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr1:150447400-150451200 Enhancers Ovary ovary
38 chr1:150447600-150451200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:150448400-150450800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:150448400-150450800 Enhancers Fetal Adrenal Gland Adrenal Gland
41 chr1:150448400-150450800 Enhancers K562 blood
42 chr1:150448400-150451000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:150449000-150450600 Enhancers Fetal Muscle Leg muscle
44 chr1:150449000-150452400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:150449200-150450400 Enhancers HSMMtube muscle
46 chr1:150449200-150450600 Enhancers NHDF-Ad bronchial
47 chr1:150449200-150451200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:150449200-150451200 Enhancers Sigmoid Colon Sigmoid Colon
49 chr1:150449200-150452000 Enhancers HMEC breast
50 chr1:150449400-150450800 Enhancers Osteobl bone

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Last update: Aug 31, 2015