The 2.0 version of rSNPBase

Variant report

Variant rs12141218
Chromosome Location chr1:150448707-150448708
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150444800-150459000 Weak transcription GM12878-XiMat blood
2 chr1:150445000-150449000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:150445000-150452800 Enhancers HepG2 liver
4 chr1:150445000-150459400 Weak transcription Fetal Brain Male brain
5 chr1:150445200-150449000 Weak transcription HSMM muscle
6 chr1:150445200-150449200 Weak transcription Small Intestine intestine
7 chr1:150445200-150449200 Weak transcription HMEC breast
8 chr1:150445200-150449600 Weak transcription NH-A brain
9 chr1:150445200-150450600 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr1:150445400-150448800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr1:150445400-150449000 Weak transcription NHEK skin
12 chr1:150445400-150449600 Weak transcription Colon Smooth Muscle Colon
13 chr1:150445400-150449800 Enhancers Skeletal Muscle Female skeletal muscle
14 chr1:150445400-150449800 Weak transcription HUVEC blood vessel
15 chr1:150445400-150450400 Weak transcription Fetal Kidney kidney
16 chr1:150445400-150450400 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr1:150445400-150459400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr1:150445600-150449000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr1:150445600-150449400 Weak transcription Placenta Amnion Placenta Amnion
20 chr1:150445600-150449800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr1:150445600-150449800 Weak transcription Lung lung
22 chr1:150445600-150449800 Weak transcription Stomach Mucosa stomach
23 chr1:150445600-150449800 Weak transcription A549 lung
24 chr1:150445600-150450000 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr1:150445600-150450800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr1:150445600-150450800 Enhancers Skeletal Muscle Male skeletal muscle
27 chr1:150445800-150448800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr1:150445800-150448800 Weak transcription Psoas Muscle Psoas
29 chr1:150445800-150449000 Weak transcription Aorta Aorta
30 chr1:150445800-150449000 Weak transcription Fetal Muscle Leg muscle
31 chr1:150445800-150449000 Weak transcription Left Ventricle heart
32 chr1:150445800-150449200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr1:150445800-150449200 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr1:150445800-150449200 Weak transcription Adipose Nuclei Adipose
35 chr1:150445800-150449600 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr1:150445800-150449800 Weak transcription Colonic Mucosa Colon
37 chr1:150445800-150449800 Weak transcription Duodenum Mucosa Duodenum
38 chr1:150445800-150449800 Weak transcription Placenta Placenta
39 chr1:150445800-150449800 Weak transcription Gastric stomach
40 chr1:150445800-150449800 Weak transcription Right Ventricle heart
41 chr1:150445800-150450200 Weak transcription Fetal Lung lung
42 chr1:150445800-150450200 Weak transcription Stomach Smooth Muscle stomach
43 chr1:150445800-150450400 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr1:150445800-150451600 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr1:150445800-150459400 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr1:150445800-150459400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:150445800-150459600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr1:150446000-150449200 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr1:150446000-150449200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:150446000-150449600 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015